Difference between revisions of "Ec-20 002250"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UBIQUITIN--PROTEIN-LIGASE-RXN UBIQUITIN--PROTEIN-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Gene == Gene Ec-20_002250 == * left end position: ** 2281588 * transcription direction: ** POSITIVE * right end position: ** 2297269 * centisome position: ** 44.2...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UBIQUITIN--PROTEIN-LIGASE-RXN UBIQUITIN--PROTEIN-LIGASE-RXN] ==
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== Gene Ec-20_002250 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2281588
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* common name:
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* transcription direction:
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** ubiquitin-protein transferase
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** POSITIVE
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** Ubiquitin-activating enzyme e1, C-terminal
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* right end position:
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** putative ubiquitin activating enzyme
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** 2297269
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** Ubiquitin activating enzyme (E1) subunit UBA3
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* centisome position:
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* ec number:
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** 44.247513   
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** [http://enzyme.expasy.org/EC/6.2.1.45 EC-6.2.1.45]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0023_0168
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** Esi0023_0168
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11989]]
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** 1 [[Ubiquitin-activating-protein-E1-L-cys]][c] '''+''' 1 [[Ubiquitin-C-Terminal-Glycine]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 a [ubiquitin] C-terminal glycine[c] '''+''' 1 ATP[c] '''=>''' 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* Reaction: [[RXN-11999]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_007490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-00_007160]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-25_002490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_006720]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_009550]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-25_000910]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-09_000720]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-22_002200]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-25_000920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_001660]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001990]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_010570]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_002840]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_002450]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-25_000510]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-16_001360]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_003730]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-13_002660]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_003940]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-26_001140]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-09_004750]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000320]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-18_001830]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-25_002630]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_008900]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6681]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2281588}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03876 R03876]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=2297269}}
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** [http://www.uniprot.org/uniprot/P22314 P22314]
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{{#set: centisome position=44.247513    }}
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** [http://www.uniprot.org/uniprot/P49459 P49459]
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{{#set: common name=Esi_0023_0168|Esi0023_0168}}
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** [http://www.uniprot.org/uniprot/P62256 P62256]
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{{#set: reaction associated=RXN-11989|RXN-11999}}
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** [http://www.uniprot.org/uniprot/P63146 P63146]
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{{#set: pathway associated=PWY-6681}}
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** [http://www.uniprot.org/uniprot/P28263 P28263]
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** [http://www.uniprot.org/uniprot/Q02053 Q02053]
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** [http://www.uniprot.org/uniprot/P62257 P62257]
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** [http://www.uniprot.org/uniprot/P61088 P61088]
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** [http://www.uniprot.org/uniprot/P63279 P63279]
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** [http://www.uniprot.org/uniprot/P19812 P19812]
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** [http://www.uniprot.org/uniprot/P21734 P21734]
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** [http://www.uniprot.org/uniprot/P25869 P25869]
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** [http://www.uniprot.org/uniprot/P31254 P31254]
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** [http://www.uniprot.org/uniprot/P15731 P15731]
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** [http://www.uniprot.org/uniprot/P15732 P15732]
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** [http://www.uniprot.org/uniprot/P29340 P29340]
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** [http://www.uniprot.org/uniprot/P35133 P35133]
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** [http://www.uniprot.org/uniprot/P35134 P35134]
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** [http://www.uniprot.org/uniprot/P35132 P35132]
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** [http://www.uniprot.org/uniprot/P33296 P33296]
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** [http://www.uniprot.org/uniprot/P22515 P22515]
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** [http://www.uniprot.org/uniprot/P39940 P39940]
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** [http://www.uniprot.org/uniprot/P42748 P42748]
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** [http://www.uniprot.org/uniprot/P42750 P42750]
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** [http://www.uniprot.org/uniprot/P42749 P42749]
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** [http://www.uniprot.org/uniprot/P42747 P42747]
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** [http://www.uniprot.org/uniprot/P50623 P50623]
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** [http://www.uniprot.org/uniprot/Q42973 Q42973]
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** [http://www.uniprot.org/uniprot/P40984 P40984]
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** [http://www.uniprot.org/uniprot/Q92462 Q92462]
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** [http://www.uniprot.org/uniprot/Q42540 Q42540]
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** [http://www.uniprot.org/uniprot/P93028 P93028]
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** [http://www.uniprot.org/uniprot/P93393 P93393]
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** [http://www.uniprot.org/uniprot/P31252 P31252]
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** [http://www.uniprot.org/uniprot/P52486 P52486]
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** [http://www.uniprot.org/uniprot/Q9YGM6 Q9YGM6]
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** [http://www.uniprot.org/uniprot/O42646 O42646]
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** [http://www.uniprot.org/uniprot/O15979 O15979]
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** [http://www.uniprot.org/uniprot/P23566 P23566]
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** [http://www.uniprot.org/uniprot/Q96PU5 Q96PU5]
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** [http://www.uniprot.org/uniprot/P27949 P27949]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ubiquitin-protein transferase}}
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{{#set: common name=Ubiquitin-activating enzyme e1, C-terminal}}
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{{#set: common name=putative ubiquitin activating enzyme}}
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{{#set: common name=Ubiquitin activating enzyme (E1) subunit UBA3}}
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{{#set: ec number=EC-6.2.1.45}}
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{{#set: gene associated=Ec-01_007490|Ec-00_007160|Ec-25_002490|Ec-14_006720|Ec-01_009550|Ec-25_000910|Ec-09_000720|Ec-22_002200|Ec-25_000920|Ec-01_001660|Ec-14_001990|Ec-01_010570|Ec-27_002840|Ec-06_002450|Ec-25_000510|Ec-16_001360|Ec-14_003730|Ec-13_002660|Ec-24_003940|Ec-26_001140|Ec-09_004750|Ec-12_000320|Ec-18_001830|Ec-25_002630|Ec-01_008900}}
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{{#set: in pathway=PWY-7511}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:44, 21 March 2018

Gene Ec-20_002250

  • left end position:
    • 2281588
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2297269
  • centisome position:
    • 44.247513
  • Synonym(s):
    • Esi_0023_0168
    • Esi0023_0168

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_002250&oldid=29054"