Difference between revisions of "Ec-10 001440"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Gene == Gene Ec-10_001440 == * left end position: ** 1517720 * transcription direction: ** NEGATIVE * right end position: ** 1527238 * centisome position: ** 23.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] ==
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== Gene Ec-10_001440 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1517720
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
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** NEGATIVE
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* right end position:
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** 1527238
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* centisome position:
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** 23.346   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0073_0118
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** Esi0073_0118
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-474]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CPD-520]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 oxygen[c] '''+''' 1 (+)-taxifolin[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 quercetin[c] '''+''' 1 H2O[c] '''+''' 1 CO2[c]
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* Reaction: [[RXN0-4961]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-08_003510]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002750]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002760]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5390]], rutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1517720}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02160 R02160]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1527238}}
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{{#set: ec number=EC-1.14.11.23}}
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{{#set: centisome position=23.346    }}
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{{#set: gene associated=Ec-08_003510|Ec-19_002750|Ec-19_002760}}
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{{#set: common name=Esi_0073_0118|Esi0073_0118}}
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{{#set: in pathway=PWY-3101|PWY-5390|PWY-6787}}
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{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN|RXN0-4961}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:44, 21 March 2018

Gene Ec-10_001440

  • left end position:
    • 1517720
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1527238
  • centisome position:
    • 23.346
  • Synonym(s):
    • Esi_0073_0118
    • Esi0073_0118

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_001440&oldid=29064"