Difference between revisions of "RXN-13444"

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(Created page with "Category:Gene == Gene Ec-20_004700 == * left end position: ** 4780466 * transcription direction: ** POSITIVE * right end position: ** 4786805 * centisome position: ** 92.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-20_004700 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] ==
* left end position:
+
* direction:
** 4780466
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
* right end position:
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** 4786805
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* centisome position:
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** 92.70899   
+
 
* Synonym(s):
 
* Synonym(s):
** Esi_0010_0210
 
** Esi0010_0210
 
** MEP4
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[RXN-9839]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[CPD-14424]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14425]][c]
***automated-name-match
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* With common name(s):
== Pathways associated ==
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** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]
* [[PWY-6082]]
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* [[PWY-6073]]
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== Genes associated with this reaction  ==
 +
== Pathways  ==
 +
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4780466}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.1.134}}
{{#set: right end position=4786805}}
+
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
{{#set: centisome position=92.70899    }}
+
{{#set: reconstruction category=annotation}}
{{#set: common name=Esi_0010_0210|Esi0010_0210|MEP4}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: reaction associated=RXN-9839}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: pathway associated=PWY-6082|PWY-6073}}
+

Latest revision as of 19:47, 21 March 2018

Reaction RXN-13444

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] => 1 H2O[c] + 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links