Difference between revisions of "Ec-11 005820"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-969 RXN-969] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate Oxidase ** Alpha-hydr...")
(Created page with "Category:Gene == Gene Ec-11_005820 == * left end position: ** 5799531 * transcription direction: ** POSITIVE * right end position: ** 5804661 * centisome position: ** 92.2...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-969 RXN-969] ==
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== Gene Ec-11_005820 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5799531
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* common name:
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* transcription direction:
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** Glycolate Oxidase
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** POSITIVE
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** Alpha-hydroxy acid dehydrogenase, FMN-dependent
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* right end position:
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* ec number:
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** 5804661
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** [http://enzyme.expasy.org/EC/1.1.3.15 EC-1.1.3.15]
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* centisome position:
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** 92.20741   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0031_0082
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** Esi0031_0082
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CHORISMATE-SYNTHASE-RXN]]
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** 1 [[GLYCOLLATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[GLYOX]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 glycolate[c] '''+''' 1 oxygen[c] '''=>''' 1 glyoxylate[c] '''+''' 1 hydrogen peroxide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-23_000460]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_004150]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-15_000450]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-181]], photorespiration: [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[PWY-6163]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5799531}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5804661}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00475 R00475]
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{{#set: centisome position=92.20741    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0031_0082|Esi0031_0082}}
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{{#set: common name=Glycolate Oxidase}}
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{{#set: reaction associated=CHORISMATE-SYNTHASE-RXN}}
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{{#set: common name=Alpha-hydroxy acid dehydrogenase, FMN-dependent}}
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{{#set: pathway associated=PWY-6163}}
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{{#set: ec number=EC-1.1.3.15}}
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{{#set: gene associated=Ec-23_000460|Ec-12_004150|Ec-15_000450}}
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{{#set: in pathway=PWY-181}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Gene Ec-11_005820

  • left end position:
    • 5799531
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5804661
  • centisome position:
    • 92.20741
  • Synonym(s):
    • Esi_0031_0082
    • Esi0031_0082

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005820&oldid=29331"