Difference between revisions of "RXN0-882"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrodipicolinate reducta...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-882 RXN0-882] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-hydroxy-2-methyl-2-(E)-bute...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-882 RXN0-882] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dihydrodipicolinate reductase
+
** 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast precursor
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.1.8 EC-1.17.1.8]
+
** [http://enzyme.expasy.org/EC/1.17.7.1 EC-1.17.7.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14443]][c] '''=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''=>''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
+
** 1 2-C-methyl-D-erythritol-2,4-cyclodiphosphate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H+[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-15_000750]]
+
* Gene: [[Ec-03_003610]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 35: Line 29:
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04199 R04199]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08689 R08689]
−
** [http://www.genome.jp/dbget-bin/www_bget?R04198 R04198]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=dihydrodipicolinate reductase}}
+
{{#set: common name=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast precursor}}
−
{{#set: ec number=EC-1.17.1.8}}
+
{{#set: ec number=EC-1.17.7.1}}
−
{{#set: gene associated=Ec-15_000750}}
+
{{#set: gene associated=Ec-03_003610}}
−
{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
+
{{#set: in pathway=PWY-7560}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:47, 21 March 2018

Reaction RXN0-882

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-882&oldid=29354"