Difference between revisions of "CPD-308"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-308 CPD-308] == * smiles: ** C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O * inchi...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-308 CPD-308] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O
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* inchi key:
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** InChIKey=LMKYZBGVKHTLTN-NKWVEPMBSA-M
 
* common name:
 
* common name:
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** threonine--tRNA ligase
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** D-nopaline
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/6.1.1.3 EC-6.1.1.3]
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** 303.294   
 
* Synonym(s):
 
* Synonym(s):
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** N2-(D-1,3-dicarboxypropyl)-L-arginine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[THR-tRNAs]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[AMP]][c]
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* [[1.5.1.19-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a tRNAthr[c] '''+''' 1 L-threonine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-threonyl-[tRNAthr][c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-05_005060]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24624 24624]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49791983 49791983]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58074 58074]
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O83809 O83809]
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** [http://www.genome.jp/dbget-bin/www_bget?C01682 C01682]
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** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
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{{#set: smiles=C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O}}
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** [http://www.uniprot.org/uniprot/P56071 P56071]
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{{#set: inchi key=InChIKey=LMKYZBGVKHTLTN-NKWVEPMBSA-M}}
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** [http://www.uniprot.org/uniprot/O58430 O58430]
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{{#set: common name=D-nopaline}}
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** [http://www.uniprot.org/uniprot/P47615 P47615]
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{{#set: molecular weight=303.294    }}
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** [http://www.uniprot.org/uniprot/O05947 O05947]
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{{#set: common name=N2-(D-1,3-dicarboxypropyl)-L-arginine}}
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** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
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{{#set: produced by=1.5.1.19-RXN}}
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** [http://www.uniprot.org/uniprot/O67583 O67583]
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** [http://www.uniprot.org/uniprot/O27504 O27504]
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** [http://www.uniprot.org/uniprot/O51662 O51662]
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** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
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** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
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** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
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** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
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** [http://www.uniprot.org/uniprot/P43014 P43014]
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** [http://www.uniprot.org/uniprot/P46244 P46244]
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** [http://www.uniprot.org/uniprot/P75225 P75225]
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** [http://www.uniprot.org/uniprot/Q48989 Q48989]
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** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
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** [http://www.uniprot.org/uniprot/O04630 O04630]
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** [http://www.uniprot.org/uniprot/P18255 P18255]
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** [http://www.uniprot.org/uniprot/P18256 P18256]
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** [http://www.uniprot.org/uniprot/P04801 P04801]
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** [http://www.uniprot.org/uniprot/P07236 P07236]
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** [http://www.uniprot.org/uniprot/P26639 P26639]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=threonine--tRNA ligase}}
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{{#set: ec number=EC-6.1.1.3}}
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{{#set: gene associated=Ec-05_005060}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Metabolite CPD-308

  • smiles:
    • C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O
  • inchi key:
    • InChIKey=LMKYZBGVKHTLTN-NKWVEPMBSA-M
  • common name:
    • D-nopaline
  • molecular weight:
    • 303.294
  • Synonym(s):
    • N2-(D-1,3-dicarboxypropyl)-L-arginine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C([O-])(=O)CCC([N+]C(C(=O)[O-])CCCNC(N)=[N+])C([O-])=O" cannot be used as a page name in this wiki.



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