Difference between revisions of "Ec-20 003150"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-882 RXN0-882] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-hydroxy-2-methyl-2-(E)-bute...")
(Created page with "Category:Gene == Gene Ec-20_003150 == * left end position: ** 3278669 * transcription direction: ** NEGATIVE * right end position: ** 3287112 * centisome position: ** 63.5...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-882 RXN0-882] ==
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== Gene Ec-20_003150 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3278669
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* common name:
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* transcription direction:
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** 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast precursor
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.17.7.1 EC-1.17.7.1]
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** 3287112
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* centisome position:
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** 63.584198   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0123_0030
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** Esi0123_0030
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ENOYL-COA-DELTA-ISOM-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 2-C-methyl-D-erythritol-2,4-cyclodiphosphate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_003610]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5137]]
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* [[FAO-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3278669}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08689 R08689]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3287112}}
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{{#set: common name=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast precursor}}
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{{#set: centisome position=63.584198    }}
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{{#set: ec number=EC-1.17.7.1}}
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{{#set: common name=Esi_0123_0030|Esi0123_0030}}
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{{#set: gene associated=Ec-03_003610}}
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{{#set: reaction associated=ENOYL-COA-DELTA-ISOM-RXN}}
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{{#set: in pathway=PWY-7560}}
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{{#set: pathway associated=PWY-5137|FAO-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:48, 21 March 2018

Gene Ec-20_003150

  • left end position:
    • 3278669
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3287112
  • centisome position:
    • 63.584198
  • Synonym(s):
    • Esi_0123_0030
    • Esi0123_0030

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_003150&oldid=29392"