Difference between revisions of "Ec-12 006850"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTALDEHYD-RXN HISTALDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Histidinol dehy...")
(Created page with "Category:Gene == Gene Ec-12_006850 == * left end position: ** 6198863 * transcription direction: ** NEGATIVE * right end position: ** 6204477 * centisome position: ** 74.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTALDEHYD-RXN HISTALDEHYD-RXN] ==
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== Gene Ec-12_006850 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6198863
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* common name:
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* transcription direction:
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** Histidinol dehydrogenase
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** NEGATIVE
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** Aldehyde/histidinol dehydrogenase
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* right end position:
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** 6204477
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* centisome position:
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** 74.36209   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0226_0036
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** Esi0226_0036
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[HISTIDINAL]][c] '''=>''' 1 [[HIS]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 histidinal[c] '''=>''' 1 L-histidine[c] '''+''' 1 NADH[c] '''+''' 2 H+[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* [[Ec-16_001760]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***EC-NUMBER
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* Reaction: [[RXN-10711]]
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* [[Ec-20_001280]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-10767]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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*** Assignment: automated-name-match
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* Reaction: [[RXN-12252]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXNQT-4366]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6198863}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33803 33803]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6204477}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01163 R01163]
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{{#set: centisome position=74.36209    }}
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* UNIPROT:
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{{#set: common name=Esi_0226_0036|Esi0226_0036}}
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** [http://www.uniprot.org/uniprot/P24226 P24226]
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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** [http://www.uniprot.org/uniprot/P44001 P44001]
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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** [http://www.uniprot.org/uniprot/O34651 O34651]
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** [http://www.uniprot.org/uniprot/P63950 P63950]
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** [http://www.uniprot.org/uniprot/Q9RSI4 Q9RSI4]
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** [http://www.uniprot.org/uniprot/Q02136 Q02136]
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** [http://www.uniprot.org/uniprot/Q9JTH9 Q9JTH9]
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** [http://www.uniprot.org/uniprot/O30027 O30027]
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** [http://www.uniprot.org/uniprot/Q9PM77 Q9PM77]
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** [http://www.uniprot.org/uniprot/P10370 P10370]
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** [http://www.uniprot.org/uniprot/P06988 P06988]
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** [http://www.uniprot.org/uniprot/O66976 O66976]
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** [http://www.uniprot.org/uniprot/Q58851 Q58851]
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** [http://www.uniprot.org/uniprot/O26327 O26327]
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** [http://www.uniprot.org/uniprot/Q9X0D1 Q9X0D1]
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** [http://www.uniprot.org/uniprot/P18786 P18786]
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** [http://www.uniprot.org/uniprot/P28736 P28736]
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** [http://www.uniprot.org/uniprot/P45353 P45353]
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** [http://www.uniprot.org/uniprot/Q12670 Q12670]
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** [http://www.uniprot.org/uniprot/P72946 P72946]
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** [http://www.uniprot.org/uniprot/P73058 P73058]
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** [http://www.uniprot.org/uniprot/P00815 P00815]
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** [http://www.uniprot.org/uniprot/P07685 P07685]
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** [http://www.uniprot.org/uniprot/P16245 P16245]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Histidinol dehydrogenase}}
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{{#set: common name=Aldehyde/histidinol dehydrogenase}}
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{{#set: gene associated=Ec-16_001760|Ec-20_001280}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:48, 21 March 2018

Gene Ec-12_006850

  • left end position:
    • 6198863
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6204477
  • centisome position:
    • 74.36209
  • Synonym(s):
    • Esi_0226_0036
    • Esi0226_0036

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_006850&oldid=29437"