Difference between revisions of "Ec-11 005170"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] == * direction: ** LEFT-TO-RIGHT * common name: ** N,N'-diacetylchitobiose &be...")
(Created page with "Category:Gene == Gene Ec-11_005170 == * left end position: ** 5181025 * transcription direction: ** NEGATIVE * right end position: ** 5189977 * centisome position: ** 82.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] ==
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== Gene Ec-11_005170 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5181025
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* common name:
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* transcription direction:
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** N,N'-diacetylchitobiose β-N-acetylglucosaminidase
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** NEGATIVE
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** Chitobiase/beta-hexosaminidase C-terminal domain
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* right end position:
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* ec number:
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** 5189977
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** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
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* centisome position:
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** 82.37372   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0071_0094
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** Esi0071_0094
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CDPKIN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CHITOBIOSE]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 N,N'-diacetylchitobiose[c] '''=>''' 2 N-acetyl-D-glucosamine[c]
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* Reaction: [[DADPKIN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[DCDPKIN-RXN]]
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* [[Ec-12_001990]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***AUTOMATED-NAME-MATCH
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* Reaction: [[DGDPKIN-RXN]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6902]], chitin degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902]
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*** Assignment: go-term
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[DTDPKIN-RXN]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: go-term
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* Reaction: [[DUDPKIN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[GDPKIN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[NUCLEOSIDE-DIP-KIN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-14120]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-14228]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[UDPKIN-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5181025}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5189977}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
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{{#set: centisome position=82.37372    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0071_0094|Esi0071_0094}}
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{{#set: common name=N,N'-diacetylchitobiose β-N-acetylglucosaminidase}}
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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{{#set: common name=Chitobiase/beta-hexosaminidase C-terminal domain}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: ec number=EC-3.2.1.52}}
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{{#set: gene associated=Ec-12_001990}}
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{{#set: in pathway=PWY-6902}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:49, 21 March 2018

Gene Ec-11_005170

  • left end position:
    • 5181025
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5189977
  • centisome position:
    • 82.37372
  • Synonym(s):
    • Esi_0071_0094
    • Esi0071_0094

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005170&oldid=29523"