Difference between revisions of "R344-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] == * direction: ** LEFT-TO-RIGHT * common name: ** Magnesium chelatase subunit H...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cob(I)yrinic acid a,c-diamide...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Magnesium chelatase subunit H, putative chloroplast precursor
+
** cob(I)yrinic acid a,c-diamide adenosyltransferase
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** Magnesium chelatase subunit D, putative chloroplast precursor
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* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.6.1.1 EC-6.6.1.1]
+
** [http://enzyme.expasy.org/EC/2.5.1.17 EC-2.5.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MG+2]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[MG-PROTOPORPHYRIN]][c]
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** 1 [[CPD-694]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[P3I]][c] '''+''' 1 [[CPD-690]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 Mg2+[c] '''+''' 1 H2O[c] '''+''' 1 protoporphyrin IX[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 3 H+[c] '''+''' 1 Mg-protoporphyrin[c]
+
** 1 cob(I)yrinate a,c-diamide[c] '''+''' 1 ATP[c] '''=>''' 1 PPPi[c] '''+''' 1 adenosyl-cobyrinate a,c-diamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-14_006490]]
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* Gene: [[Ec-06_010830]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** Assignment: GO-TERM
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* [[Ec-01_002840]]
+
−
** ESILICULOSUS_GENOME
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−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-02_001580]]
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−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
+
* [[PWY-5509]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5509 PWY-5509]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
+
* [[PWY-5508]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5508 PWY-5508]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13961 13961]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11528 11528]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03877 R03877]
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** [http://www.genome.jp/dbget-bin/www_bget?R05220 R05220]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Magnesium chelatase subunit H, putative chloroplast precursor}}
+
{{#set: common name=cob(I)yrinic acid a,c-diamide adenosyltransferase}}
−
{{#set: common name=Magnesium chelatase subunit D, putative chloroplast precursor}}
+
{{#set: ec number=EC-2.5.1.17}}
−
{{#set: ec number=EC-6.6.1.1}}
+
{{#set: gene associated=Ec-06_010830}}
−
{{#set: gene associated=Ec-14_006490|Ec-01_002840|Ec-02_001580}}
+
{{#set: in pathway=PWY-5509|PWY-5508}}
−
{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:49, 21 March 2018

Reaction R344-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cob(I)yrinic acid a,c-diamide adenosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cob(I)yrinate a,c-diamide[c] + 1 ATP[c] => 1 PPPi[c] + 1 adenosyl-cobyrinate a,c-diamide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5509, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: PWY-5509
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5508, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: PWY-5508
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=R344-RXN&oldid=29558"