Difference between revisions of "RXN1G-1439"

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(Created page with "Category:Gene == Gene Ec-11_003270 == * left end position: ** 3381930 * transcription direction: ** NEGATIVE * right end position: ** 3389069 * centisome position: ** 53.7...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1439 RXN1G-1439] == * direction: ** LEFT-TO-RIGHT * common name: ** Trehalose 6-phosphate syn...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-11_003270 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1439 RXN1G-1439] ==
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* left end position:
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* direction:
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** 3381930
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
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* right end position:
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** HAD-like domain
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** 3389069
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
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** 53.769695   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0048_0123
 
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** Esi0048_0123
 
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** ODC
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ORNDECARBOX-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[WATER]][c] '''+''' 1 [[CPD1G-774]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD1G-1354]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 6-O-trans-keto-mycolyl-trehalose 6-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 trehalose-trans-keto-mono-mycolate[c]
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* [[ORNDEG-PWY]]
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* [[PWY-6305]]
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== Genes associated with this reaction  ==
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* [[PWY-46]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_003140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-08_005270]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-24_004390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-05_002680]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-22_003320]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_003980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-19_005250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-11_002540]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''30''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3381930}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
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{{#set: right end position=3389069}}
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{{#set: common name=HAD-like domain}}
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{{#set: centisome position=53.769695    }}
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{{#set: ec number=EC-3.1.3.12}}
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{{#set: common name=Esi_0048_0123|Esi0048_0123|ODC}}
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{{#set: gene associated=Ec-06_003140|Ec-08_005270|Ec-24_004390|Ec-05_002680|Ec-22_003320|Ec-20_003980|Ec-19_005250|Ec-11_002540}}
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{{#set: reaction associated=ORNDECARBOX-RXN}}
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{{#set: in pathway=PWYG-321}}
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{{#set: pathway associated=ORNDEG-PWY|PWY-6305|PWY-46}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:10, 21 March 2018

Reaction RXN1G-1439

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
    • HAD-like domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 6-O-trans-keto-mycolyl-trehalose 6-phosphate[c] => 1 phosphate[c] + 1 trehalose-trans-keto-mono-mycolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 30 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN1G-1439&oldid=25083"