Difference between revisions of "Ec-19 000870"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PFRUCTPHOS-RXN 6PFRUCTPHOS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphofructo...")
(Created page with "Category:Gene == Gene Ec-19_000870 == * left end position: ** 1033942 * transcription direction: ** POSITIVE * right end position: ** 1046800 * centisome position: ** 17.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PFRUCTPHOS-RXN 6PFRUCTPHOS-RXN] ==
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== Gene Ec-19_000870 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1033942
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* common name:
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* transcription direction:
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** 6-phosphofructokinase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.1.11 EC-2.7.1.11]
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** 1046800
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* centisome position:
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** 17.316965   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0054_0013
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** Esi0054_0013
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACID-PHOSPHATASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''=>''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 ATP[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c] '''=>''' 1 fructose 1,6-bisphosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* Reaction: [[RXN-5822]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_002540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-22_000070]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-14_003880]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
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** '''8''' reactions found over '''10''' reactions in the full pathway
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* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
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** '''11''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6348]]
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* [[PWY-5083]]
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* [[NADPHOS-DEPHOS-PWY]]
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* [[NAD-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1033942}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16109 16109]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1046800}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00756 R00756]
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{{#set: centisome position=17.316965    }}
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* UNIPROT:
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{{#set: common name=Esi_0054_0013|Esi0054_0013}}
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** [http://www.uniprot.org/uniprot/Q7M3F7 Q7M3F7]
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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** [http://www.uniprot.org/uniprot/Q7M4J2 Q7M4J2]
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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** [http://www.uniprot.org/uniprot/P12382 P12382]
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** [http://www.uniprot.org/uniprot/Q27665 Q27665]
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** [http://www.uniprot.org/uniprot/P52034 P52034]
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** [http://www.uniprot.org/uniprot/Q7M4K9 Q7M4K9]
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** [http://www.uniprot.org/uniprot/P43863 P43863]
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** [http://www.uniprot.org/uniprot/P20275 P20275]
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** [http://www.uniprot.org/uniprot/P47457 P47457]
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** [http://www.uniprot.org/uniprot/Q01813 Q01813]
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** [http://www.uniprot.org/uniprot/Q07636 Q07636]
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** [http://www.uniprot.org/uniprot/P16861 P16861]
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** [http://www.uniprot.org/uniprot/P16862 P16862]
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** [http://www.uniprot.org/uniprot/P00512 P00512]
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** [http://www.uniprot.org/uniprot/P0A796 P0A796]
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** [http://www.uniprot.org/uniprot/P06999 P06999]
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** [http://www.uniprot.org/uniprot/P08237 P08237]
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** [http://www.uniprot.org/uniprot/P00511 P00511]
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** [http://www.uniprot.org/uniprot/P70927 P70927]
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** [http://www.uniprot.org/uniprot/Q7M3F5 Q7M3F5]
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** [http://www.uniprot.org/uniprot/Q9TWY0 Q9TWY0]
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** [http://www.uniprot.org/uniprot/P30835 P30835]
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** [http://www.uniprot.org/uniprot/Q03215 Q03215]
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** [http://www.uniprot.org/uniprot/Q03216 Q03216]
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** [http://www.uniprot.org/uniprot/P80019 P80019]
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** [http://www.uniprot.org/uniprot/Q59214 Q59214]
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** [http://www.uniprot.org/uniprot/Q27705 Q27705]
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** [http://www.uniprot.org/uniprot/P75476 P75476]
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** [http://www.uniprot.org/uniprot/P72830 P72830]
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** [http://www.uniprot.org/uniprot/Q55988 Q55988]
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** [http://www.uniprot.org/uniprot/Q49084 Q49084]
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** [http://www.uniprot.org/uniprot/O08333 O08333]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=6-phosphofructokinase}}
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{{#set: ec number=EC-2.7.1.11}}
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{{#set: gene associated=Ec-12_002540|Ec-22_000070|Ec-14_003880}}
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{{#set: in pathway=PWY-1042|GLYCOLYSIS|PWY-7385|PWY-1861|ANAGLYCOLYSIS-PWY|PWY-5484}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:49, 21 March 2018

Gene Ec-19_000870

  • left end position:
    • 1033942
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1046800
  • centisome position:
    • 17.316965
  • Synonym(s):
    • Esi_0054_0013
    • Esi0054_0013

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_000870&oldid=29607"