Difference between revisions of "Ec-01 004980"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
 
(Created page with "Category:Gene == Gene Ec-01_004980 == * left end position: ** 4280060 * transcription direction: ** NEGATIVE * right end position: ** 4287063 * centisome position: ** 41.4...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
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== Gene Ec-01_004980 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4280060
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* common name:
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* transcription direction:
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** peptide-aspartate beta-dioxygenase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
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** 4287063
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* centisome position:
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** 41.478138   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0018_0114
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** Esi0018_0114
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDROFOLATESYNTH-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 oxygen[c] '''+''' 1 a [protein]-L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 a [protein]-3-hydroxy-L-aspartate[c]
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* Reaction: [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[FORMYLTHFGLUSYNTH-RXN]]
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* [[Ec-24_001390]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***GO-TERM
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* Reaction: [[RXN0-2921]]
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* [[Ec-14_006050]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***GO-TERM
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== Pathways associated ==
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* [[Ec-24_000830]]
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* [[PWY-2161]]
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** ESILICULOSUS_GENOME
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* [[PWY-6614]]
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***GO-TERM
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* [[Ec-06_006420]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4280060}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4287063}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
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{{#set: centisome position=41.478138    }}
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* UNIPROT:
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{{#set: common name=Esi_0018_0114|Esi0018_0114}}
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** [http://www.uniprot.org/uniprot/Q28056 Q28056]
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{{#set: reaction associated=DIHYDROFOLATESYNTH-RXN|FOLYLPOLYGLUTAMATESYNTH-RXN|FORMYLTHFGLUSYNTH-RXN|RXN0-2921}}
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** [http://www.uniprot.org/uniprot/Q93178 Q93178]
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{{#set: pathway associated=PWY-2161|PWY-6614}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=peptide-aspartate beta-dioxygenase}}
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{{#set: ec number=EC-1.14.11.16}}
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{{#set: gene associated=Ec-24_001390|Ec-14_006050|Ec-24_000830|Ec-06_006420}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:10, 21 March 2018

Gene Ec-01_004980

  • left end position:
    • 4280060
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4287063
  • centisome position:
    • 41.478138
  • Synonym(s):
    • Esi_0018_0114
    • Esi0018_0114

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_004980&oldid=25091"