Difference between revisions of "RXN-11213"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.38-RXN 2.4.1.38-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** Methylmalonate Semialdehyde...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.38-RXN 2.4.1.38-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Methylmalonate Semialdehyde Dehydrogenase
 +
** Methylmalonate-semialdehyde dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.38 EC-2.4.1.38]
+
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[BETA-ACETYLGLUCOSAMINIDE]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[HCO3]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 UDP[c] '''+''' 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 H+[c]
+
** 1 (S)-methylmalonate-semialdehyde[c] '''+''' 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 hydrogen carbonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-10_003810]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_003440]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
+
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 23: Line 33:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22932 22932]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04495 R04495]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P15535 P15535]
+
−
** [http://www.uniprot.org/uniprot/P15291 P15291]
+
−
** [http://www.uniprot.org/uniprot/Q7LZ60 Q7LZ60]
+
−
** [http://www.uniprot.org/uniprot/P08037 P08037]
+
−
** [http://www.uniprot.org/uniprot/Q90580 Q90580]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.4.1.38}}
+
{{#set: common name=Methylmalonate Semialdehyde Dehydrogenase}}
−
{{#set: in pathway=PWY-7434}}
+
{{#set: common name=Methylmalonate-semialdehyde dehydrogenase}}
 +
{{#set: ec number=EC-1.2.1.27}}
 +
{{#set: gene associated=Ec-10_003810|Ec-06_003440}}
 +
{{#set: in pathway=VALDEG-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN-11213

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methylmalonate Semialdehyde Dehydrogenase
    • Methylmalonate-semialdehyde dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-methylmalonate-semialdehyde[c] + 1 coenzyme A[c] + 1 NAD+[c] + 1 H2O[c] => 1 NADH[c] + 1 H+[c] + 1 propanoyl-CoA[c] + 1 hydrogen carbonate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11213&oldid=29647"