Difference between revisions of "RXN0-5180"

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(Created page with "Category:Gene == Gene Ec-04_004960 == * left end position: ** 5047328 * transcription direction: ** NEGATIVE * right end position: ** 5054883 * centisome position: ** 77.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.5...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-04_004960 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] ==
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* left end position:
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* direction:
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** 5047328
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** REVERSIBLE
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
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* right end position:
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** 5054883
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* centisome position:
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** 77.50988   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0037_0100
 
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** Esi0037_0100
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[FARNESYL-PP]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''<=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''<=>''' 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] '''+''' 1 diphosphate[c]
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* [[PWY-4041]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-27_002140]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-05_002690]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-17_003520]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-18_000990]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-08_002270]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-24_003910]]
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** Source: [[orthology-aragem]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5047328}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
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{{#set: right end position=5054883}}
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* LIGAND-RXN:
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{{#set: centisome position=77.50988    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
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{{#set: common name=Esi_0037_0100|Esi0037_0100}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN}}
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{{#set: ec number=EC-2.5.1}}
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{{#set: pathway associated=PWY-4041}}
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{{#set: gene associated=Ec-27_002140|Ec-05_002690|Ec-17_003520|Ec-18_000990|Ec-08_002270|Ec-24_003910}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN0-5180

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,6E)-farnesyl diphosphate[c] + 1 isopentenyl diphosphate[c] <=> 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5180&oldid=29730"