Difference between revisions of "Ec-14 006720"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2541 RXN-2541] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Ec-14_006720 == * left end position: ** 6201803 * transcription direction: ** NEGATIVE * right end position: ** 6212659 * centisome position: ** 94.5...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2541 RXN-2541] ==
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== Gene Ec-14_006720 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6201803
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.115 EC-2.5.1.115]
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** NEGATIVE
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* right end position:
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** 6212659
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* centisome position:
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** 94.533516   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0063_0073
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** Esi0063_0073
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 [[HOMOGENTISATE]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MPBQ]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 homogentisate[c] '''+''' 1 phytyl diphosphate[c] '''+''' 1 H+[c] '''=>''' 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 diphosphate[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-21_000990]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7511]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6201803}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6212659}}
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{{#set: ec number=EC-2.5.1.115}}
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{{#set: centisome position=94.533516    }}
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{{#set: gene associated=Ec-21_000990}}
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{{#set: common name=Esi_0063_0073|Esi0063_0073}}
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{{#set: in pathway=PWY-1422}}
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{{#set: reaction associated=UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Gene Ec-14_006720

  • left end position:
    • 6201803
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6212659
  • centisome position:
    • 94.533516
  • Synonym(s):
    • Esi_0063_0073
    • Esi0063_0073

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_006720&oldid=29740"