Difference between revisions of "PYRIDOXKIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-96 CPD1F-96] == * smiles: ** C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C=O)([CH](CC2)3)4)C([O-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxamine kina...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-96 CPD1F-96] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] ==
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* smiles:
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* direction:
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** C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C=O)([CH](CC2)3)4)C([O-])=O))C([O-])=O)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VNCQCPQAMDQEBY-YTJHIPEWSA-L
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* common name:
 
* common name:
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** gibberellin A19
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** Pyridoxamine kinase
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* molecular weight:
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* ec number:
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** 360.406   
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** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** GA19
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN1F-168]]
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** 1 [[PYRIDOXAL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 pyridoxal[c] '''+''' 1 ATP[c] '''=>''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_001230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25200921 25200921]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10224 10224]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58587 58587]
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** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C02034 C02034]
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** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
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* HMDB : HMDB36896
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** [http://www.uniprot.org/uniprot/P44690 P44690]
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{{#set: smiles=C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C=O)([CH](CC2)3)4)C([O-])=O))C([O-])=O)))}}
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** [http://www.uniprot.org/uniprot/P77150 P77150]
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{{#set: inchi key=InChIKey=VNCQCPQAMDQEBY-YTJHIPEWSA-L}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=gibberellin A19}}
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{{#set: common name=Pyridoxamine kinase}}
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{{#set: molecular weight=360.406    }}
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{{#set: ec number=EC-2.7.1.35}}
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{{#set: common name=GA19}}
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{{#set: gene associated=Ec-02_001230}}
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{{#set: produced by=RXN1F-168}}
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{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction PYRIDOXKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxamine kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 5 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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