Difference between revisions of "Ec-01 007100"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Gene == Gene Ec-01_007100 == * left end position: ** 6081663 * transcription direction: ** NEGATIVE * right end position: ** 6086884 * centisome position: ** 58.9...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] ==
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== Gene Ec-01_007100 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6081663
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* common name:
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* transcription direction:
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** UbiA prenyltransferase family
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** NEGATIVE
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** 4-hydroxybenzoate nonaprenyltransferase
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* right end position:
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* ec number:
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** 6086884
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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* centisome position:
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** 58.9375   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0002_0211
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** Esi0002_0211
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3-OXOACYL-ACP-REDUCT-RXN]]
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** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[OCTAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-OCTAPRENYL-4-HYDROXYBENZOATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-octaprenyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-octaprenyl-4-hydroxybenzoate[c]
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* Reaction: [[RXN-10060]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10655]]
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* [[Ec-00_007360]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-10659]]
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* [[Ec-00_007350]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-11476]]
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* [[Ec-25_002110]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-11480]]
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* [[Ec-24_003910]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-13008]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
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*** Assignment: ec-number
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RXN-16616]]
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* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
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** Source: [[annotation-esiliculosus_genome]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-16622]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16626]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16630]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9514]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9518]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9524]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9528]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9532]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9536]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9540]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9552]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9556]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9633]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-2142]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-157]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-349]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-469]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-508]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-7388]]
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* [[PWY-5367]]
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* [[PWY-5994]]
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* [[PWY-6282]]
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* [[PWY-5973]]
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* [[PWY-5989]]
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* [[PWY-5971]]
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* [[PWYG-321]]
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* [[PWY-7663]]
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* [[PWY-7664]]
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* [[PWY3O-355]]
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* [[PWY0-862]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6081663}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27782 27782]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6086884}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05615 R05615]
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{{#set: centisome position=58.9375    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0002_0211|Esi0002_0211}}
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{{#set: common name=UbiA prenyltransferase family}}
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{{#set: reaction associated=3-OXOACYL-ACP-REDUCT-RXN|RXN-10060|RXN-10655|RXN-10659|RXN-11476|RXN-11480|RXN-13008|RXN-16616|RXN-16622|RXN-16626|RXN-16630|RXN-9514|RXN-9518|RXN-9524|RXN-9528|RXN-9532|RXN-9536|RXN-9540|RXN-9552|RXN-9556|RXN-9633|RXN0-2142|RXN1G-157|RXN1G-349|RXN1G-469|RXN1G-508}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5367|PWY-5994|PWY-6282|PWY-5973|PWY-5989|PWY-5971|PWYG-321|PWY-7663|PWY-7664|PWY3O-355|PWY0-862}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: gene associated=Ec-00_007360|Ec-00_007350|Ec-25_002110|Ec-24_003910}}
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{{#set: in pathway=PWY-6708|PWY-5870}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:52, 21 March 2018

Gene Ec-01_007100

  • left end position:
    • 6081663
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6086884
  • centisome position:
    • 58.9375
  • Synonym(s):
    • Esi_0002_0211
    • Esi0002_0211

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_007100&oldid=29912"