Difference between revisions of "PSII-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] == * direction: ** REVERSIBLE * common name: ** IMP cy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II Pbs27 * ec num...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** IMP cyclohydrolase
+
** Photosystem II Pbs27
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.10 EC-3.5.4.10]
+
** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
+
** 2 [[PLASTOQUINONE]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Light]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[Plastoquinols]][c] '''+''' 4 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 IMP[c] '''+''' 1 H2O[c] '''<=>''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
+
** 2 a plastoquinone[c] '''+''' 4 H+[e] '''+''' 1 h&nu;[c] '''+''' 2 H2O[c] '''=>''' 2 a plastoquinol[c] '''+''' 4 H+[c] '''+''' 1 oxygen[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-11_005390]]
+
* Gene: [[Ec-02_005010]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
+
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 37: Line 29:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18445 18445]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
+
{{#set: common name=Photosystem II Pbs27}}
−
* UNIPROT:
+
{{#set: ec number=EC-1.10.3.9}}
−
** [http://www.uniprot.org/uniprot/P43852 P43852]
+
{{#set: gene associated=Ec-02_005010}}
−
** [http://www.uniprot.org/uniprot/P12048 P12048]
+
{{#set: in pathway=PWY-101}}
−
** [http://www.uniprot.org/uniprot/P31335 P31335]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P26978 P26978]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
** [http://www.uniprot.org/uniprot/P15639 P15639]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
+
−
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
+
−
** [http://www.uniprot.org/uniprot/P31939 P31939]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=IMP cyclohydrolase}}
+
−
{{#set: ec number=EC-3.5.4.10}}
+
−
{{#set: gene associated=Ec-11_005390}}
+
−
{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:52, 21 March 2018

Reaction PSII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Photosystem II Pbs27
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-101, photosynthesis light reactions: PWY-101
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PSII-RXN&oldid=29934"