Difference between revisions of "Ec-15 000020"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Ec-15_000020 == * left end position: ** 30505 * transcription direction: ** POSITIVE * right end position: ** 34716 * centisome position: ** 0.565090...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] ==
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== Gene Ec-15_000020 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 30505
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* common name:
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* transcription direction:
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** squalene monooxygenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.14.14.17 EC-1.14.14.17]
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** 34716
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* centisome position:
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** 0.56509024   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0012_0192
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** Esi0012_0192
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[SQUALENE]][c] '''=>''' 1 [[EPOXYSQUALENE]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 squalene[c] '''=>''' 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Ec-06_009670]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***GO-TERM
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== Pathways associated ==
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== Pathways  ==
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* [[LIPAS-PWY]]
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* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
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* [[PWY-6857]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=30505}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02873 R02873]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874]
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{{#set: right end position=34716}}
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* UNIPROT:
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{{#set: centisome position=0.56509024    }}
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** [http://www.uniprot.org/uniprot/P52020 P52020]
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{{#set: common name=Esi_0012_0192|Esi0012_0192}}
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** [http://www.uniprot.org/uniprot/P32476 P32476]
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9T064 Q9T064]
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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** [http://www.uniprot.org/uniprot/O65829 O65829]
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** [http://www.uniprot.org/uniprot/O65726 O65726]
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** [http://www.uniprot.org/uniprot/O65727 O65727]
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** [http://www.uniprot.org/uniprot/O65402 O65402]
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** [http://www.uniprot.org/uniprot/O65403 O65403]
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** [http://www.uniprot.org/uniprot/O65404 O65404]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=squalene monooxygenase}}
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{{#set: ec number=EC-1.14.14.17}}
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{{#set: gene associated=Ec-06_009670}}
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{{#set: in pathway=PWY-5670|PWY-6098}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:11, 21 March 2018

Gene Ec-15_000020

  • left end position:
    • 30505
  • transcription direction:
    • POSITIVE
  • right end position:
    • 34716
  • centisome position:
    • 0.56509024
  • Synonym(s):
    • Esi_0012_0192
    • Esi0012_0192

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-15_000020&oldid=25132"