Difference between revisions of "RXN0-5330"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-05_006710 == * left end position: ** 8811113 * transcription direction: ** POSITIVE * right end position: ** 8818715 * centisome position: ** 96.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH dehydrogenase (ubiquin...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-05_006710 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] ==
−
* left end position:
+
* direction:
−
** 8811113
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** NADH dehydrogenase (ubiquinone)
−
* right end position:
+
* ec number:
−
** 8818715
+
** [http://enzyme.expasy.org/EC/1.6.5.9 EC-1.6.5.9]
−
* centisome position:
+
−
** 96.78815   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0153_0050
 
−
** Esi0153_0050
 
−
** UDP-glucose 4-ep
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[UDPGLUCEPIM-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[Ubiquinones]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Ubiquinols]][c]
−
***go-term
+
* With common name(s):
−
** [[pantograph]]-[[aragem]]
+
** 1 a ubiquinone[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 an ubiquinol[c]
−
== Pathways associated ==
+
 
−
* [[PWY-3821]]
+
== Genes associated with this reaction  ==
−
* [[PWY-6397]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-6317]]
+
* Gene: [[Ec-18_003900]]
−
* [[PWY-6527]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PWY-7328]]
+
*** Assignment: GO-TERM
−
* [[COLANSYN-PWY]]
+
* Gene: [[Ec-05_005740]]
−
* [[PWY66-422]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PWY-7344]]
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-02_006350]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways ==
 +
* [[PWY0-1567]], NADH to cytochrome bo oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1568]], NADH to cytochrome bd oxidase electron transport II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1568 PWY0-1568]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7269 PWY-7269]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=8811113}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23152 23152]
−
{{#set: right end position=8818715}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=96.78815    }}
+
{{#set: common name=NADH dehydrogenase (ubiquinone)}}
−
{{#set: common name=Esi_0153_0050|Esi0153_0050|UDP-glucose 4-ep}}
+
{{#set: ec number=EC-1.6.5.9}}
−
{{#set: reaction associated=UDPGLUCEPIM-RXN}}
+
{{#set: gene associated=Ec-18_003900|Ec-05_005740|Ec-02_006350}}
−
{{#set: pathway associated=PWY-3821|PWY-6397|PWY-6317|PWY-6527|PWY-7328|COLANSYN-PWY|PWY66-422|PWY-7344}}
+
{{#set: in pathway=PWY0-1567|PWY0-1568|PWY-7269|PWY-7279}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:54, 21 March 2018

Reaction RXN0-5330

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NADH dehydrogenase (ubiquinone)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a ubiquinone[c] + 1 H+[c] + 1 NADH[c] => 1 NAD+[c] + 1 an ubiquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1567, NADH to cytochrome bo oxidase electron transfer II: PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1568, NADH to cytochrome bd oxidase electron transport II: PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269, NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): PWY-7269
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5330&oldid=30123"