Difference between revisions of "RXN66-480"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-480 RXN66-480] == * direction: ** LEFT-TO-RIGHT * common name: ** phytenoyl-CoA synthetase **...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-480 RXN66-480] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
+
** phytenoyl-CoA synthetase
 +
** long chain acyl-coA synthetase
 +
** long chain acyl-CoA synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.31 EC-1.1.1.31]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CPD-12175]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD-14927]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD-14928]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 (S)-3-hydroxy-isobutanoate[c] '''=>''' 1 H+[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''+''' 1 NADH[c]
+
** 1 coenzyme A[c] '''+''' 1 phytenate[c] '''+''' 1 ATP[c] '''=>''' 1 phytenoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-11_000140]]
+
* Gene: [[Ec-01_001560]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-14_006530]]
+
* Gene: [[Ec-02_006430]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_008720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-03_003710]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
+
* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P29266 P29266]
 
−
** [http://www.uniprot.org/uniprot/P28811 P28811]
 
−
** [http://www.uniprot.org/uniprot/Q8XAE4 Q8XAE4]
 
−
** [http://www.uniprot.org/uniprot/Q55702 Q55702]
 
−
** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain}}
+
{{#set: common name=phytenoyl-CoA synthetase}}
−
{{#set: ec number=EC-1.1.1.31}}
+
{{#set: common name=long chain acyl-coA synthetase}}
−
{{#set: gene associated=Ec-11_000140|Ec-14_006530}}
+
{{#set: common name=long chain acyl-CoA synthetase}}
−
{{#set: in pathway=VALDEG-PWY}}
+
{{#set: ec number=EC-6.2.1.3}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: gene associated=Ec-01_001560|Ec-02_006430|Ec-12_008720|Ec-03_003710}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: in pathway=PWY66-389}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:54, 21 March 2018

Reaction RXN66-480

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytenoyl-CoA synthetase
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 phytenate[c] + 1 ATP[c] => 1 phytenoyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-389, phytol degradation: PWY66-389
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN66-480&oldid=30204"