Difference between revisions of "Ec-01 006350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.5...")
(Created page with "Category:Gene == Gene Ec-01_006350 == * left end position: ** 5488055 * transcription direction: ** POSITIVE * right end position: ** 5492226 * centisome position: ** 53.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] ==
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== Gene Ec-01_006350 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 5488055
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/5.5.1.18 EC-5.5.1.18]
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** POSITIVE
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* right end position:
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** 5492226
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* centisome position:
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** 53.184837   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0002_0321
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** Esi0002_0321
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4.2.99.18-RXN]]
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** 1 [[CPD1F-114]][c] '''<=>''' 1 [[CPD1F-115]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 all-trans-lycopene[c] '''<=>''' 1 &delta;-carotene[c]
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* Reaction: [[RXN0-2601]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-10_006240]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-07_007260]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-02_005510]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-00_005820]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-00_005850]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_002150]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_002140]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-5946]], &delta;-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=5488055}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06963 R06963]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: right end position=5492226}}
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{{#set: ec number=EC-5.5.1.18}}
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{{#set: centisome position=53.184837    }}
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{{#set: gene associated=Ec-10_006240|Ec-07_007260|Ec-02_005510|Ec-00_005820|Ec-00_005850|Ec-24_002150|Ec-24_002140}}
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{{#set: common name=Esi_0002_0321|Esi0002_0321}}
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{{#set: in pathway=PWY-5946}}
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{{#set: reaction associated=4.2.99.18-RXN|RXN0-2601}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:54, 21 March 2018

Gene Ec-01_006350

  • left end position:
    • 5488055
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5492226
  • centisome position:
    • 53.184837
  • Synonym(s):
    • Esi_0002_0321
    • Esi0002_0321

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_006350&oldid=30225"