Difference between revisions of "4.2.2.10-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCTP DCTP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(OP([O-])([O-])=O)([O-])=O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.10-RXN 4.2.2.10-RXN] == * direction: ** REVERSIBLE * common name: ** Pectin lyase fold * ec n...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCTP DCTP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.10-RXN 4.2.2.10-RXN] ==
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* smiles:
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* direction:
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** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(OP([O-])([O-])=O)([O-])=O)([O-])=O
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** REVERSIBLE
−
* inchi key:
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−
** InChIKey=RGWHQCVHVJXOKC-SHYZEUOFSA-J
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* common name:
 
* common name:
−
** dCTP
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** Pectin lyase fold
−
* molecular weight:
+
* ec number:
−
** 463.127   
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** [http://enzyme.expasy.org/EC/4.2.2.10 EC-4.2.2.10]
 
* Synonym(s):
 
* Synonym(s):
−
** 2'-deoxycytidine-5'-triphosphate
 
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** deoxycytidine-triphosphate
 
−
** deoxy-CTP
 
  
−
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14216]]
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* With identifiers:
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* [[RXN-14198]]
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** 1 [[Pectin]][c] '''<=>''' n [[CPD-12980]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
−
* [[RXN0-723]]
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** 1 a pectin[c] '''<=>''' n an oligosaccharide with 4-deoxy-6-O-methyl-&alpha;-D-galact-4-enuronate end[c]
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* [[DCDPKIN-RXN]]
+
 
−
== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-09_004230]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000860]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-09_004260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_001360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_001490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_010800]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000940]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002330]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_006370]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_009490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_001160]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_000350]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-25_001080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-18_004360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000930]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_004740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-20_003120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_001170]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-23_004040]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002310]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-04_001770]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_000190]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_003140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_011490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_000410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-20_003100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 2056-98-6
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* UNIPROT:
−
* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q47512 Q47512]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244665 25244665]
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** [http://www.uniprot.org/uniprot/Q02726 Q02726]
−
* HMDB : HMDB00998
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** [http://www.uniprot.org/uniprot/P22864 P22864]
−
* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P24112 P24112]
−
** [http://www.genome.jp/dbget-bin/www_bget?C00458 C00458]
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** [http://www.uniprot.org/uniprot/P27027 P27027]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q01172 Q01172]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61481 61481]
+
** [http://www.uniprot.org/uniprot/Q12639 Q12639]
−
* BIGG : 35027
+
{{#set: direction=REVERSIBLE}}
−
{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP(OP(OP([O-])([O-])=O)([O-])=O)([O-])=O}}
+
{{#set: common name=Pectin lyase fold}}
−
{{#set: inchi key=InChIKey=RGWHQCVHVJXOKC-SHYZEUOFSA-J}}
+
{{#set: ec number=EC-4.2.2.10}}
−
{{#set: common name=dCTP}}
+
{{#set: gene associated=Ec-09_004230|Ec-08_000860|Ec-09_004260|Ec-08_000920|Ec-21_001360|Ec-21_001490|Ec-00_010800|Ec-08_000940|Ec-13_002330|Ec-00_006370|Ec-00_009490|Ec-13_002640|Ec-02_001160|Ec-14_000350|Ec-25_001080|Ec-18_004360|Ec-08_000930|Ec-14_004740|Ec-20_003120|Ec-02_001170|Ec-23_004040|Ec-13_002310|Ec-13_002650|Ec-04_001770|Ec-14_000190|Ec-21_003140|Ec-00_011490|Ec-12_000410|Ec-20_003100}}
−
{{#set: molecular weight=463.127    }}
+
{{#set: in pathway=}}
−
{{#set: common name=2'-deoxycytidine-5'-triphosphate|deoxycytidine-triphosphate|deoxy-CTP}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: consumed by=RXN-14216|RXN-14198}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: produced by=RXN0-723|DCDPKIN-RXN}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:55, 21 March 2018

Reaction 4.2.2.10-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Pectin lyase fold
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a pectin[c] <=> n an oligosaccharide with 4-deoxy-6-O-methyl-α-D-galact-4-enuronate end[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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