Difference between revisions of "RETINOL-DEHYDROGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acyl-sn-glycerol-3-phosph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17729 RXN-17729] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 1-acyl-sn-glycerol-3-phosphate acyltransferase
+
** all-trans-retinol dehydrogenase (NAD)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
 
* Synonym(s):
 
* Synonym(s):
 +
** all-trans retinol dehydrogenase
 +
** retinal reductase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[1-Alkyl-glycerol-3-phosphate]][c] '''=>''' 1 [[1-Alkyl-2-acyl-glycerol-3-phosphate]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[CPD-13524]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a long-chain acyl-CoA[c] '''+''' 1 a 1-alkyl-sn-glycerol 3-phosphate[c] '''=>''' 1 a 2-acyl-1-alkyl-sn-glycerol 3-phosphate[c] '''+''' 1 coenzyme A[c]
+
** 1 all-trans-retinol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 all-trans-retinal[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_004670]]
+
* Gene: [[Ec-16_001960]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-02_006160]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-26_001280]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-21_003240]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
 
−
** '''6''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=1-acyl-sn-glycerol-3-phosphate acyltransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21284 21284]
−
{{#set: ec number=EC-2.3.1.51}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Ec-12_004670|Ec-02_006160|Ec-26_001280|Ec-21_003240}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
−
{{#set: in pathway=PWY-7782}}
+
* UNIPROT:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P50169 P50169]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P40394 P40394]
 +
** [http://www.uniprot.org/uniprot/P50170 P50170]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=all-trans-retinol dehydrogenase (NAD)}}
 +
{{#set: ec number=EC-1.1.1.105}}
 +
{{#set: common name=all-trans retinol dehydrogenase|retinal reductase}}
 +
{{#set: gene associated=Ec-16_001960}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:55, 21 March 2018

Reaction RETINOL-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • all-trans-retinol dehydrogenase (NAD)
  • ec number:
  • Synonym(s):
    • all-trans retinol dehydrogenase
    • retinal reductase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinol[c] + 1 NAD+[c] <=> 1 NADH[c] + 1 H+[c] + 1 all-trans-retinal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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