Difference between revisions of "RIBITOL-2-DEHYDROGENASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-D-XYLOSE UDP-D-XYLOSE] == * smiles: ** C3(OC(OP(=O)([O-])OP(=O)([O-])OCC1(OC(C(O)C(O)1)N2(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBITOL-2-DEHYDROGENASE-RXN RIBITOL-2-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common nam...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-D-XYLOSE UDP-D-XYLOSE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBITOL-2-DEHYDROGENASE-RXN RIBITOL-2-DEHYDROGENASE-RXN] ==
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* smiles:
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* direction:
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** C3(OC(OP(=O)([O-])OP(=O)([O-])OCC1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)))C(O)C(O)C(O)3)
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** REVERSIBLE
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* inchi key:
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** InChIKey=DQQDLYVHOTZLOR-OCIMBMBZSA-L
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* common name:
 
* common name:
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** UDP-α-D-xylose
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** Glucose/ribitol dehydrogenase
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* molecular weight:
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* ec number:
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** 534.263   
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** [http://enzyme.expasy.org/EC/1.1.1.56 EC-1.1.1.56]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[RIBITOL]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[D-RIBULOSE]][c] '''+''' 1 [[NADH]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[2.4.2.38-RXN]]
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** 1 NAD+[c] '''+''' 1 ribitol[c] '''<=>''' 1 H+[c] '''+''' 1 D-ribulose[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-18_004080]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-00_004550]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_007650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-09_001020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_003500]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-27_002470]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[RIBITOLUTIL-PWY]], ribitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=RIBITOLUTIL-PWY RIBITOLUTIL-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 3616-06-6
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20053 20053]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=16667349 16667349]
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* LIGAND-RXN:
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* HMDB : HMDB01018
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** [http://www.genome.jp/dbget-bin/www_bget?R01895 R01895]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C00190 C00190]
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** [http://www.uniprot.org/uniprot/P00335 P00335]
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* CHEMSPIDER:
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{{#set: direction=REVERSIBLE}}
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** [http://www.chemspider.com/Chemical-Structure.17600385.html 17600385]
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{{#set: common name=Glucose/ribitol dehydrogenase}}
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* CHEBI:
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{{#set: ec number=EC-1.1.1.56}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57632 57632]
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{{#set: gene associated=Ec-18_004080|Ec-00_004550|Ec-12_007650|Ec-09_001020|Ec-01_004330|Ec-20_003500|Ec-27_002470}}
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* METABOLIGHTS : MTBLC57632
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{{#set: in pathway=RIBITOLUTIL-PWY}}
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{{#set: smiles=C3(OC(OP(=O)([O-])OP(=O)([O-])OCC1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)))C(O)C(O)C(O)3)}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=DQQDLYVHOTZLOR-OCIMBMBZSA-L}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=UDP-&alpha;-D-xylose}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=534.263    }}
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{{#set: produced by=UDP-GLUCURONATE-DECARBOXYLASE-RXN}}
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{{#set: reversible reaction associated=2.4.2.38-RXN}}
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Latest revision as of 19:55, 21 March 2018

Reaction RIBITOL-2-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Glucose/ribitol dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 ribitol[c] <=> 1 H+[c] + 1 D-ribulose[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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