Difference between revisions of "Ec-10 005410"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLALD-DEHYDROG-RXN GLYCOLALD-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
(Created page with "Category:Gene == Gene Ec-10_005410 == * left end position: ** 5508891 * transcription direction: ** POSITIVE * right end position: ** 5515451 * centisome position: ** 84.7...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLALD-DEHYDROG-RXN GLYCOLALD-DEHYDROG-RXN] ==
+
== Gene Ec-10_005410 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5508891
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.2.1.21 EC-1.2.1.21]
+
** POSITIVE
 +
* right end position:
 +
** 5515451
 +
* centisome position:
 +
** 84.73933   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0006_0075
 +
** Esi0006_0075
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3PGAREARR-RXN]]
−
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[GLYCOLLATE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 glycolaldehyde[c] '''=>''' 1 NADH[c] '''+''' 2 H+[c] '''+''' 1 glycolate[c]
+
** Source: [[orthology-aragem]]
−
 
+
** Source: [[orthology-aragem]]
−
== Genes associated with this reaction  ==
+
== Pathways associated ==
−
== Pathways  ==
+
* [[PWY-1042]]
−
* [[PWY0-1280]], ethylene glycol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1280 PWY0-1280]
+
* [[P341-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-2221]]
−
* [[DARABCATK12-PWY]], D-arabinose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY]
+
* [[GLUCONEO-PWY]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[GLYCOLYSIS]]
−
== Reconstruction information  ==
+
* [[PWY-6901]]
−
* Category: [[gap-filling]]
+
* [[PWY-7218]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
* [[P124-PWY]]
−
*** Tool: [[meneco]]
+
* [[PWY-6886]]
−
**** Comment: [[added for gapfilling]]
+
* [[PWY-5723]]
 +
* [[PWY-6142]]
 +
* [[PWY-5484]]
 +
* [[PWY-7124]]
 +
* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=5508891}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20001 20001]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=5515451}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01333 R01333]
+
{{#set: centisome position=84.73933    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Esi_0006_0075|Esi0006_0075}}
−
{{#set: ec number=EC-1.2.1.21}}
+
{{#set: reaction associated=3PGAREARR-RXN}}
−
{{#set: in pathway=PWY0-1280|DARABCATK12-PWY}}
+
{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|PWY-7218|P124-PWY|PWY-6886|PWY-5723|PWY-6142|PWY-5484|PWY-7124|PWY-7003}}
−
{{#set: reconstruction category=gap-filling}}
+
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
−
{{#set: reconstruction tool=meneco}}
+
−
{{#set: reconstruction comment=added for gapfilling}}
+

Latest revision as of 19:55, 21 March 2018

Gene Ec-10_005410

  • left end position:
    • 5508891
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5515451
  • centisome position:
    • 84.73933
  • Synonym(s):
    • Esi_0006_0075
    • Esi0006_0075

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_005410&oldid=30347"