Difference between revisions of "UDP-GLUCURONATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE UDP-GLUCURONATE] == * smiles: ** C3(=CC(NC(N(C1(OC(C(C1O)O)COP(=O)(OP([O-])(OC2...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE UDP-GLUCURONATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C3(=CC(NC(N(C1(OC(C(C1O)O)COP(=O)(OP([O-])(OC2(C(C(C(C(O2)C([O-])=O)O)O)O))=O)[O-]))3)=O)=O)
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* inchi key:
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** InChIKey=HDYANYHVCAPMJV-LXQIFKJMSA-K
 
* common name:
 
* common name:
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** 2-oxoglutarate dehydrogenase complex
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** UDP-α-D-glucuronate
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** dihydrolipoamide dehydrogenase
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* molecular weight:
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** 2-oxoglutarate dehydrogenase E1 component
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** 577.265   
 
* Synonym(s):
 
* Synonym(s):
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** 2-oxoglutarate dehydrogenation
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** (UDP-GlcA)1
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** α-ketoglutarate oxidative decarboxylation
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** UDP-D-glucuronic acid
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** UDP-glucuronic acid
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** udp-glcua
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** UDP-glucuronate
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** uridine diphosphate glucuronate
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** uridine diphosphate glucuronic acid
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** UDP-D-glucuronate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC-COA]][c] '''+''' 1 [[NADH]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[UGD-RXN]]
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** 1 NAD+[c] '''+''' 1 coenzyme A[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 CO2[c] '''+''' 1 succinyl-CoA[c] '''+''' 1 NADH[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-21_002300]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-27_004160]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-25_000020]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 2616-64-0
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27786 27786]
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* BIGG : 34117
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202620 25202620]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB00935
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{{#set: common name=2-oxoglutarate dehydrogenase complex}}
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* LIGAND-CPD:
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{{#set: common name=dihydrolipoamide dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00167 C00167]
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{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
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* CHEBI:
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{{#set: common name=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58052 58052]
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{{#set: gene associated=Ec-21_002300|Ec-27_004160|Ec-25_000020}}
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* METABOLIGHTS : MTBLC58052
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{{#set: in pathway=PWY-7254|TCA|PWY-5690}}
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{{#set: smiles=C3(=CC(NC(N(C1(OC(C(C1O)O)COP(=O)(OP([O-])(OC2(C(C(C(C(O2)C([O-])=O)O)O)O))=O)[O-]))3)=O)=O)}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=HDYANYHVCAPMJV-LXQIFKJMSA-K}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=UDP-α-D-glucuronate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=577.265    }}
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{{#set: common name=(UDP-GlcA)1|UDP-D-glucuronic acid|UDP-glucuronic acid|udp-glcua|UDP-glucuronate|uridine diphosphate glucuronate|uridine diphosphate glucuronic acid|UDP-D-glucuronate}}
 +
{{#set: consumed by=UDP-GLUCURONATE-DECARBOXYLASE-RXN}}
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{{#set: produced by=UGD-RXN}}

Latest revision as of 19:56, 21 March 2018

Metabolite UDP-GLUCURONATE

  • smiles:
    • C3(=CC(NC(N(C1(OC(C(C1O)O)COP(=O)(OP([O-])(OC2(C(C(C(C(O2)C([O-])=O)O)O)O))=O)[O-]))3)=O)=O)
  • inchi key:
    • InChIKey=HDYANYHVCAPMJV-LXQIFKJMSA-K
  • common name:
    • UDP-α-D-glucuronate
  • molecular weight:
    • 577.265
  • Synonym(s):
    • (UDP-GlcA)1
    • UDP-D-glucuronic acid
    • UDP-glucuronic acid
    • udp-glcua
    • UDP-glucuronate
    • uridine diphosphate glucuronate
    • uridine diphosphate glucuronic acid
    • UDP-D-glucuronate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 2616-64-0
  • BIGG : 34117
  • PUBCHEM:
  • HMDB : HMDB00935
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC58052
"C3(=CC(NC(N(C1(OC(C(C1O)O)COP(=O)(OP([O-])(OC2(C(C(C(C(O2)C([O-])=O)O)O)O))=O)[O-]))3)=O)=O)" cannot be used as a page name in this wiki.




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