Difference between revisions of "Ec-08 002270"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ph...")
(Created page with "Category:Gene == Gene Ec-08_002270 == * left end position: ** 2142133 * transcription direction: ** NEGATIVE * right end position: ** 2144253 * centisome position: ** 31.9...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
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== Gene Ec-08_002270 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2142133
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* common name:
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* transcription direction:
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** Phosphoribulokinase/uridine kinase
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** NEGATIVE
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** P-loop containing nucleoside triphosphate hydrolase
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* right end position:
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* ec number:
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** 2144253
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** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
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* centisome position:
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** 31.986141   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0007_0145
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** Esi0007_0145
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** COX10
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GPPSYN-RXN]]
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** 1 [[RIBULOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 D-ribulose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 D-ribulose-1,5-bisphosphate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-26_002450]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-27_003910]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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* Reaction: [[RXN-9003]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9384]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN0-5180]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7736]]
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* [[PWY-6859]]
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* [[PWY-7709]]
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* [[PWY-6383]]
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* [[PWY-7235]]
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* [[PWY-7182]]
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* [[PWY-7141]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7102]]
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* [[PWY-7659]]
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* [[PWY-7410]]
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* [[PWY3O-19]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2142133}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2144253}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
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{{#set: centisome position=31.986141    }}
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* UNIPROT:
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{{#set: common name=Esi_0007_0145|Esi0007_0145|COX10}}
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** [http://www.uniprot.org/uniprot/P23010 P23010]
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{{#set: reaction associated=GPPSYN-RXN|RXN-9003|RXN-9384|RXN0-5180}}
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** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
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{{#set: pathway associated=PWY-7736|PWY-6859|PWY-7709|PWY-6383|PWY-7235|PWY-7182|PWY-7141|PWY-5123|PWY-5122|PWY-7102|PWY-7659|PWY-7410|PWY3O-19}}
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** [http://www.uniprot.org/uniprot/P19923 P19923]
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** [http://www.uniprot.org/uniprot/P19924 P19924]
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** [http://www.uniprot.org/uniprot/P23015 P23015]
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** [http://www.uniprot.org/uniprot/P12033 P12033]
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** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
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** [http://www.uniprot.org/uniprot/P09559 P09559]
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** [http://www.uniprot.org/uniprot/P25697 P25697]
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** [http://www.uniprot.org/uniprot/P93681 P93681]
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** [http://www.uniprot.org/uniprot/P19824 P19824]
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** [http://www.uniprot.org/uniprot/P27774 P27774]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoribulokinase/uridine kinase}}
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{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
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{{#set: ec number=EC-2.7.1.19}}
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{{#set: gene associated=Ec-26_002450|Ec-27_003910}}
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{{#set: in pathway=CALVIN-PWY|PWY-5723}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:57, 21 March 2018

Gene Ec-08_002270

  • left end position:
    • 2142133
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2144253
  • centisome position:
    • 31.986141
  • Synonym(s):
    • Esi_0007_0145
    • Esi0007_0145
    • COX10

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_002270&oldid=30544"