Difference between revisions of "RXN-11999"

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(Created page with "Category:Gene == Gene Ec-04_001890 == * Synonym(s): ** Esi_0015_0097 ** Esi0015_0097 == Reactions associated == * RXN-8443 ** pantograph-aragem == Pathways as...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11999 RXN-11999] == * direction: ** LEFT-TO-RIGHT * common name: ** Carotenoid oxygenase * Syno...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-04_001890 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11999 RXN-11999] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** Carotenoid oxygenase
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0015_0097
 
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** Esi0015_0097
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-8443]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[CPD-12932]][c] '''=>''' 1 [[CPD-12936]][c]
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== Pathways associated ==
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* With common name(s):
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* [[PWY-5381]]
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** 1 all-trans-3,4-didehydrolycopene[c] '''=>''' 1 apo-4'-lycopenal[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-21_004930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_002250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_002810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_002830]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-18_002140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Esi_0015_0097|Esi0015_0097}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-8443}}
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{{#set: common name=Carotenoid oxygenase}}
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{{#set: pathway associated=PWY-5381}}
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{{#set: gene associated=Ec-21_004930|Ec-20_002250|Ec-06_002810|Ec-06_002830|Ec-18_002140}}
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{{#set: in pathway=PWY-6681}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction RXN-11999

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carotenoid oxygenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-3,4-didehydrolycopene[c] => 1 apo-4'-lycopenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11999&oldid=30545"