Difference between revisions of "RXN-15271"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15271 RXN-15271] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15271 RXN-15271] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** 6-phosphogluconate dehydrogenase, C-terminal-like
 
** 3-hydroxyacyl-CoA dehydrogenase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** [http://enzyme.expasy.org/EC/2.4.99.1 EC-2.4.99.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[K-HEXANOYL-COA]][c] '''=>''' 1 [[OH-HEXANOYL-COA]][c] '''+''' 1 [[NAD]][c]
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** 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[CMP-N-ACETYL-NEURAMINATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[CPD-16483]][c]
 
* With common name(s):
 
* With common name(s):
** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxohexanoyl-CoA[c] '''=>''' 1 (S)-3-hydroxyhexanoyl-CoA[c] '''+''' 1 NAD+[c]
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** 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 CMP-N-acetyl-β-neuraminate[c] '''=>''' 1 H+[c] '''+''' 1 CMP[c] '''+''' 1 α-N-acetylneuraminyl-2,6-β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-19_005290]]
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
* [[Ec-14_006530]]
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
** '''7''' reactions found over '''11''' reactions in the full pathway
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** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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{{#set: ec number=EC-2.4.99.1}}
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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{{#set: in pathway=PWY-7434}}
{{#set: ec number=EC-1.1.1.35}}
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{{#set: reconstruction category=annotation}}
{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: in pathway=PWY-6863}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:58, 21 March 2018

Reaction RXN-15271

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] + 1 CMP-N-acetyl-β-neuraminate[c] => 1 H+[c] + 1 CMP[c] + 1 α-N-acetylneuraminyl-2,6-β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c]

Genes associated with this reaction

Pathways

  • PWY-7434, terminal O-glycans residues modification: PWY-7434
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links