Difference between revisions of "RXN-5822"

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(Created page with "Category:Gene == Gene Ec-10_001980 == * left end position: ** 1984249 * transcription direction: ** NEGATIVE * right end position: ** 1998471 * centisome position: ** 30.5...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] == * direction: ** LEFT-TO-RIGHT * common name: ** acid phosphatase * ec number:...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-10_001980 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5822 RXN-5822] ==
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* left end position:
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* direction:
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** 1984249
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** acid phosphatase
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* right end position:
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* ec number:
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** 1998471
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** [http://enzyme.expasy.org/EC/3.1.3.2 EC-3.1.3.2]
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.3.1 EC-3.1.3.1]
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** 30.522282   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0168_0016
 
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** Esi0168_0016
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.5.1.98-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[NAD]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 NAD+[c]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-21_005990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-19_002110]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-19_000870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-20_002470]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-07_000930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-24_000520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-05_000260]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-05_004740]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-27_003870]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-20_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-00_000940]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-26_006410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-21_003560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways ==
 +
* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[NADPHOS-DEPHOS-PWY]], NAD phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY NADPHOS-DEPHOS-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1984249}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28050 28050]
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{{#set: right end position=1998471}}
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* LIGAND-RXN:
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{{#set: centisome position=30.522282    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00118 R00118]
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{{#set: common name=Esi_0168_0016|Esi0168_0016}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.5.1.98-RXN}}
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{{#set: common name=acid phosphatase}}
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{{#set: ec number=EC-3.1.3.2}}
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{{#set: ec number=EC-3.1.3.1}}
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{{#set: gene associated=Ec-21_005990|Ec-19_002110|Ec-19_000870|Ec-20_002470|Ec-07_000930|Ec-24_000520|Ec-05_000260|Ec-05_004740|Ec-27_003870|Ec-20_003560|Ec-00_000940|Ec-26_006410|Ec-21_003560}}
 +
{{#set: in pathway=PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction RXN-5822

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acid phosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 H2O[c] => 1 phosphate[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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