Difference between revisions of "Ec-01 001290"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...")
 
(Created page with "Category:Gene == Gene Ec-01_001290 == * left end position: ** 1021842 * transcription direction: ** POSITIVE * right end position: ** 1036878 * centisome position: ** 9.90...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] ==
+
== Gene Ec-01_001290 ==
* direction:
+
* left end position:
** REVERSIBLE
+
** 1021842
* common name:
+
* transcription direction:
** Thiolase-like, subgroup
+
** POSITIVE
** Hydroxymethylglutaryl-CoA synthase
+
* right end position:
* ec number:
+
** 1036878
** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10]
+
* centisome position:
 +
** 9.902689   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0151_0014
 +
** Esi0151_0014
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[ATPASE-RXN]]
** 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ACETOACETYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c]
+
** Source: [[annotation-esiliculosus_genome]]
* With common name(s):
+
*** Assignment: go-term
** 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''+''' 1 acetoacetyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c]
+
== Pathways associated ==
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Ec-21_004360]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
** [[pantograph]]-[[aragem]]
+
* [[Ec-19_002030]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
+
** '''7''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
+
** '''7''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
+
** '''4''' reactions found over '''8''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[aragem]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: left end position=1021842}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
+
{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
+
{{#set: right end position=1036878}}
** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
+
{{#set: centisome position=9.902689    }}
* UNIPROT:
+
{{#set: common name=Esi_0151_0014|Esi0151_0014}}
** [http://www.uniprot.org/uniprot/P13704 P13704]
+
{{#set: reaction associated=ATPASE-RXN}}
** [http://www.uniprot.org/uniprot/P22791 P22791]
+
** [http://www.uniprot.org/uniprot/P54870 P54870]
+
** [http://www.uniprot.org/uniprot/P54869 P54869]
+
** [http://www.uniprot.org/uniprot/O51626 O51626]
+
** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
+
** [http://www.uniprot.org/uniprot/P17425 P17425]
+
** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
+
** [http://www.uniprot.org/uniprot/Q01581 Q01581]
+
** [http://www.uniprot.org/uniprot/P54961 P54961]
+
** [http://www.uniprot.org/uniprot/P54839 P54839]
+
** [http://www.uniprot.org/uniprot/P54874 P54874]
+
** [http://www.uniprot.org/uniprot/P54868 P54868]
+
** [http://www.uniprot.org/uniprot/P54873 P54873]
+
** [http://www.uniprot.org/uniprot/P93773 P93773]
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: common name=Hydroxymethylglutaryl-CoA synthase}}
+
{{#set: ec number=EC-2.3.3.10}}
+
{{#set: gene associated=Ec-21_004360|Ec-19_002030}}
+
{{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=aragem}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:11, 21 March 2018

Gene Ec-01_001290

  • left end position:
    • 1021842
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1036878
  • centisome position:
    • 9.902689
  • Synonym(s):
    • Esi_0151_0014
    • Esi0151_0014

Reactions associated

Pathways associated

External links