|
|
(2 intermediate revisions by the same user not shown) |
Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == | + | == Gene Ec-01_001290 == |
− | * direction: | + | * left end position: |
− | ** REVERSIBLE | + | ** 1021842 |
− | * common name: | + | * transcription direction: |
− | ** Thiolase-like, subgroup | + | ** POSITIVE |
− | ** Hydroxymethylglutaryl-CoA synthase | + | * right end position: |
− | * ec number: | + | ** 1036878 |
− | ** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10] | + | * centisome position: |
| + | ** 9.902689 |
| * Synonym(s): | | * Synonym(s): |
| + | ** Esi_0151_0014 |
| + | ** Esi0151_0014 |
| | | |
− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers:
| + | * Reaction: [[ATPASE-RXN]] |
− | ** 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ACETOACETYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c]
| + | ** Source: [[annotation-esiliculosus_genome]] |
− | * With common name(s):
| + | *** Assignment: go-term |
− | ** 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''+''' 1 acetoacetyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c]
| + | == Pathways associated == |
− | | + | |
− | == Genes associated with this reaction ==
| + | |
− | Genes have been associated with this reaction based on different elements listed below.
| + | |
− | * [[Ec-21_004360]] | + | |
− | ** ESILICULOSUS_GENOME
| + | |
− | ***EC-NUMBER
| + | |
− | ** [[pantograph]]-[[aragem]]
| + | |
− | * [[Ec-19_002030]]
| + | |
− | ** ESILICULOSUS_GENOME
| + | |
− | ***EC-NUMBER
| + | |
− | == Pathways ==
| + | |
− | * [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
| + | |
− | ** '''3''' reactions found over '''5''' reactions in the full pathway
| + | |
− | * [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
| + | |
− | ** '''5''' reactions found over '''7''' reactions in the full pathway | + | |
− | * [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
| + | |
− | ** '''7''' reactions found over '''7''' reactions in the full pathway
| + | |
− | * [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
| + | |
− | ** '''7''' reactions found over '''8''' reactions in the full pathway | + | |
− | * [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571] | + | |
− | ** '''2''' reactions found over '''5''' reactions in the full pathway
| + | |
− | * [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
| + | |
− | ** '''4''' reactions found over '''8''' reactions in the full pathway
| + | |
− | == Reconstruction information == | + | |
− | * [[orthology]]:
| + | |
− | ** [[pantograph]]:
| + | |
− | *** [[aragem]]
| + | |
− | * [[annotation]]:
| + | |
− | ** [[pathwaytools]]:
| + | |
− | *** [[esiliculosus_genome]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: left end position=1021842}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
| + | {{#set: transcription direction=POSITIVE}} |
− | * LIGAND-RXN:
| + | {{#set: right end position=1036878}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
| + | {{#set: centisome position=9.902689 }} |
− | * UNIPROT:
| + | {{#set: common name=Esi_0151_0014|Esi0151_0014}} |
− | ** [http://www.uniprot.org/uniprot/P13704 P13704]
| + | {{#set: reaction associated=ATPASE-RXN}} |
− | ** [http://www.uniprot.org/uniprot/P22791 P22791]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54870 P54870]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54869 P54869]
| + | |
− | ** [http://www.uniprot.org/uniprot/O51626 O51626]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
| + | |
− | ** [http://www.uniprot.org/uniprot/P17425 P17425]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q01581 Q01581]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54961 P54961]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54839 P54839]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54874 P54874]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54868 P54868]
| + | |
− | ** [http://www.uniprot.org/uniprot/P54873 P54873]
| + | |
− | ** [http://www.uniprot.org/uniprot/P93773 P93773]
| + | |
− | {{#set: direction=REVERSIBLE}} | + | |
− | {{#set: common name=Thiolase-like, subgroup}} | + | |
− | {{#set: common name=Hydroxymethylglutaryl-CoA synthase}} | + | |
− | {{#set: ec number=EC-2.3.3.10}} | + | |
− | {{#set: gene associated=Ec-21_004360|Ec-19_002030}} | + | |
− | {{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |
− | {{#set: reconstruction source=aragem}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |
− | {{#set: reconstruction source=esiliculosus_genome}}
| + | |