Difference between revisions of "RXN-16380"

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(Created page with "Category:Gene == Gene Ec-14_005260 == * left end position: ** 4846153 * transcription direction: ** NEGATIVE * right end position: ** 4853916 * centisome position: ** 73.8...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16380 RXN-16380] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-14_005260 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16380 RXN-16380] ==
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* left end position:
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* direction:
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** 4846153
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 4853916
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 73.86947   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0100_0085
 
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** Esi0100_0085
 
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** NIN-like 4
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RIBOFLAVINKIN-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[STEARIC_ACID]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[STEAROYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 ATP[c] '''+''' 1 stearate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 stearoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* [[PWY66-366]]
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* [[PWY-6168]]
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== Genes associated with this reaction  ==
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* [[RIBOSYN2-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5523]]
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4846153}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=4853916}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=73.86947    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0100_0085|Esi0100_0085|NIN-like 4}}
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{{#set: gene associated=Ec-01_001560|Ec-02_006430|Ec-12_008720|Ec-03_003710}}
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{{#set: reaction associated=RIBOFLAVINKIN-RXN}}
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{{#set: in pathway=PWY-5989}}
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{{#set: pathway associated=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction RXN-16380

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 stearate[c] + 1 coenzyme A[c] => 1 stearoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16380&oldid=25217"