Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERVAL-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-06_003220 == * left end position: ** 2563062 * transcription direction: ** NEGATIVE * right end position: ** 2566092 * centisome position: ** 29.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] == * direction: ** REVERSIBL...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-06_003220 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] ==
−
* left end position:
+
* direction:
−
** 2563062
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** branched-chain-amino-acid transaminase
−
* right end position:
+
* ec number:
−
** 2566092
+
** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
−
* centisome position:
+
−
** 29.266188   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0064_0058
 
−
** Esi0064_0058
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
+
* With identifiers:
 +
** 1 [[VAL]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c]
 +
* With common name(s):
 +
** 1 L-valine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 3-methyl-2-oxobutanoate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_005560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-12_005530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-12_005520]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-20_001390]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[ALANINE-VALINESYN-PWY]], L-alanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2563062}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24813 24813]
−
{{#set: right end position=2566092}}
+
* LIGAND-RXN:
−
{{#set: centisome position=29.266188    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01214 R01214]
−
{{#set: common name=Esi_0064_0058|Esi0064_0058}}
+
* UNIPROT:
−
{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
+
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
 +
** [http://www.uniprot.org/uniprot/P38891 P38891]
 +
** [http://www.uniprot.org/uniprot/P47176 P47176]
 +
** [http://www.uniprot.org/uniprot/O86505 O86505]
 +
** [http://www.uniprot.org/uniprot/O14370 O14370]
 +
** [http://www.uniprot.org/uniprot/O32954 O32954]
 +
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=branched-chain-amino-acid transaminase}}
 +
{{#set: ec number=EC-2.6.1.42}}
 +
{{#set: gene associated=Ec-12_005560|Ec-12_005530|Ec-12_005520|Ec-20_001390}}
 +
{{#set: in pathway=VALSYN-PWY|VALDEG-PWY|ALANINE-VALINESYN-PWY|PWY-5057}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 18:59, 21 March 2018

Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain-amino-acid transaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-valine[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 3-methyl-2-oxobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=BRANCHED-CHAINAMINOTRANSFERVAL-RXN&oldid=23659"