Difference between revisions of "Ec-04 006300"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-...")
(Created page with "Category:Gene == Gene Ec-04_006300 == * left end position: ** 6214439 * transcription direction: ** POSITIVE * right end position: ** 6223273 * centisome position: ** 95.4...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] ==
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== Gene Ec-04_006300 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-183963]
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** 6214439
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* common name:
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* transcription direction:
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** methylaspartate cycle
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** POSITIVE
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* right end position:
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** 6223273
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* centisome position:
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** 95.432755   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0134_0030
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** Esi0134_0030
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** PGDH
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''11''' reactions found over '''18''' reactions in the full pathway
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* Reaction: [[PGLYCDEHYDROG-RXN]]
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* [[ACONITATEDEHYDR-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Ec-16_001000]]
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** Source: [[orthology-aragem]]
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*** [[Ec-12_000170]]
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== Pathways associated ==
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** 1 reconstruction source(s) associated:
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* [[SERSYN-PWY]]
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*** [[annotation-esiliculosus_genome]]
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* [[ACONITATEHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-16_001000]]
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*** [[Ec-12_000170]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-25_001360]]
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*** [[Ec-23_003460]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 3 associated gene(s):
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*** [[Ec-12_008040]]
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*** [[Ec-06_008240]]
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*** [[Ec-06_001980]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_003080]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[MALSYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-12_003860]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** 1 associated gene(s):
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*** [[Ec-01_010970]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 6 associated gene(s):
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*** [[Ec-07_007310]]
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*** [[Ec-27_006560]]
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*** [[Ec-07_002870]]
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*** [[Ec-11_000360]]
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*** [[Ec-05_003640]]
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*** [[Ec-21_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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−
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-AMMONIA-LYASE-RXN METHYLASPARTATE-AMMONIA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-MUTASE-RXN METHYLASPARTATE-MUTASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12168 RXN-12168]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-183963}}
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{{#set: left end position=6214439}}
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{{#set: common name=methylaspartate cycle}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reaction found=11}}
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{{#set: right end position=6223273}}
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{{#set: total reaction=18}}
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{{#set: centisome position=95.432755    }}
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{{#set: completion rate=61.0}}
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{{#set: common name=Esi_0134_0030|Esi0134_0030|PGDH}}
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{{#set: reaction associated=PGLYCDEHYDROG-RXN}}
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{{#set: pathway associated=SERSYN-PWY}}

Latest revision as of 18:59, 21 March 2018

Gene Ec-04_006300

  • left end position:
    • 6214439
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6223273
  • centisome position:
    • 95.432755
  • Synonym(s):
    • Esi_0134_0030
    • Esi0134_0030
    • PGDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-04_006300&oldid=23691"