Difference between revisions of "Ec-02 004370"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8497 RXN-8497] == * direction: ** LEFT-TO-RIGHT * common name: ** linolenate 9S-lipoxygenase *...")
(Created page with "Category:Gene == Gene Ec-02_004370 == * left end position: ** 4641051 * transcription direction: ** POSITIVE * right end position: ** 4657878 * centisome position: ** 71.0...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8497 RXN-8497] ==
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== Gene Ec-02_004370 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4641051
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* common name:
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* transcription direction:
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** linolenate 9S-lipoxygenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.13.11 EC-1.13.11]
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** 4657878
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* centisome position:
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** 71.09681   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0346_0021
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** Esi0346_0021
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** AS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ANTHRANSYN-RXN]]
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** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-8678]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 α-linolenate[c] '''+''' 1 oxygen[c] '''=>''' 1 9(S)-HPOTE[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-03_000010]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-20_003630]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-20_003620]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-03_000020]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5406]], divinyl ether biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5406 PWY-5406]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5407]], 9-lipoxygenase and 9-allene oxide synthase pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5407 PWY-5407]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6917]], vernolate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6917 PWY-6917]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5408]], 9-lipoxygenase and 9-hydroperoxide lyase pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5408 PWY-5408]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[TRPSYN-PWY]]
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* [[PWY-5958]]
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* [[PWY-6661]]
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* [[PWY-6660]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4641051}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07864 R07864]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4657878}}
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{{#set: common name=linolenate 9S-lipoxygenase}}
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{{#set: centisome position=71.09681    }}
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{{#set: ec number=EC-1.13.11}}
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{{#set: common name=Esi_0346_0021|Esi0346_0021|AS}}
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{{#set: gene associated=Ec-03_000010|Ec-20_003630|Ec-20_003620|Ec-03_000020}}
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{{#set: reaction associated=ANTHRANSYN-RXN}}
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{{#set: in pathway=PWY-5406|PWY-5407|PWY-6917|PWY-5408}}
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{{#set: pathway associated=TRPSYN-PWY|PWY-5958|PWY-6661|PWY-6660}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:00, 21 March 2018

Gene Ec-02_004370

  • left end position:
    • 4641051
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4657878
  • centisome position:
    • 71.09681
  • Synonym(s):
    • Esi_0346_0021
    • Esi0346_0021
    • AS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_004370&oldid=23747"