Difference between revisions of "RXN-12398"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XXLG oligosaccha...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** enterobactin biosynthesis
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** xyloglucan XXLG oligosaccharide β-galactosidase
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** Glycoside hydrolase-type carbohydrate-binding, subgroup
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** Beta-galactosidase, family GH2
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
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* [[ENTDB-RXN]]
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** 1 [[CPD-13376]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-06_004620]]
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** 1 XXLG xyloglucan oligosaccharide[c] '''+''' 1 H2O[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
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*** [[Ec-01_000130]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5901]]
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* Gene: [[Ec-06_001410]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-15889]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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* Gene: [[Ec-12_007000]]
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*** [[Ec-01_000130]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-06_004620]]
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
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== Reaction(s) not found ==
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=DHBAMPLIG-RXN DHBAMPLIG-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ENTF-RXN ENTF-RXN]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ENTG-RXN ENTG-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15890 RXN-15890]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15891 RXN-15891]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6442 RXN0-6442]
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY]
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{{#set: common name=xyloglucan XXLG oligosaccharide β-galactosidase}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=Glycoside hydrolase-type carbohydrate-binding, subgroup}}
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{{#set: common name=enterobactin biosynthesis}}
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{{#set: common name=Beta-galactosidase, family GH2}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: total reaction=10}}
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{{#set: gene associated=Ec-06_001410|Ec-12_007000}}
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{{#set: completion rate=30.0}}
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{{#set: in pathway=PWY-6807}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction RXN-12398

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XXLG oligosaccharide β-galactosidase
    • Glycoside hydrolase-type carbohydrate-binding, subgroup
    • Beta-galactosidase, family GH2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 XXLG xyloglucan oligosaccharide[c] + 1 H2O[c] => 1 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12398&oldid=23756"