Difference between revisions of "RXN-10777"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10777 RXN-10777] == * direction: ** LEFT-TO-RIGHT * common name: ** Aryl sulfotransferase ** P-...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10777 RXN-10777] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 5,6-dimethylbenzimidazole biosynthesis I (aerobic)
+
** Aryl sulfotransferase
 +
** P-loop containing nucleoside triphosphate hydrolase
 +
** Sulfotransferase domain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
 
* Synonym(s):
 
* Synonym(s):
−
** DMB biosynthesis I
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[RIBOFLAVINKIN-RXN]]
+
** 1 [[SEROTONIN]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPD-11665]][c] '''+''' 1 [[PROTON]][c]
−
** 4 associated gene(s):
+
* With common name(s):
−
*** [[Ec-04_001490]]
+
** 1 serotonin[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c] '''=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 serotonin O-sulfate[c] '''+''' 1 H+[c]
−
*** [[Ec-04_004280]]
+
 
−
*** [[Ec-10_002950]]
+
== Genes associated with this reaction  ==
−
*** [[Ec-14_005260]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Ec-06_007300]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: EC-NUMBER
−
== Reaction(s) not found ==
+
* Gene: [[Ec-06_007320]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=FMNREDUCT-RXN FMNREDUCT-RXN]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8771 RXN-8771]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_007310]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-00_005410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-26_003630]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=5,6-dimethylbenzimidazole biosynthesis I (aerobic)}}
+
{{#set: common name=Aryl sulfotransferase}}
−
{{#set: common name=DMB biosynthesis I}}
+
{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
−
{{#set: reaction found=1}}
+
{{#set: common name=Sulfotransferase domain}}
−
{{#set: total reaction=3}}
+
{{#set: ec number=EC-2.8.2.1}}
−
{{#set: completion rate=33.0}}
+
{{#set: gene associated=Ec-06_007300|Ec-06_007320|Ec-06_007310|Ec-00_005410|Ec-26_003630}}
 +
{{#set: in pathway=PWY-6313}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction RXN-10777

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aryl sulfotransferase
    • P-loop containing nucleoside triphosphate hydrolase
    • Sulfotransferase domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 serotonin[c] + 1 3'-phosphoadenylyl-sulfate[c] => 1 adenosine 3',5'-bisphosphate[c] + 1 serotonin O-sulfate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10777&oldid=23996"