Difference between revisions of "IMIDPHOSDEHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-2-HYDROXY-ACID-OXIDASE-RXN S-2-HYDROXY-ACID-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMIDPHOSDEHYD-RXN IMIDPHOSDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** HAD hydrola...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-2-HYDROXY-ACID-OXIDASE-RXN S-2-HYDROXY-ACID-OXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMIDPHOSDEHYD-RXN IMIDPHOSDEHYD-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycolate Oxidase
+
** HAD hydrolase, subfamily IA
−
** Alpha-hydroxy acid dehydrogenase, FMN-dependent
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.3.15 EC-1.1.3.15]
+
** [http://enzyme.expasy.org/EC/4.2.1.19 EC-4.2.1.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-2-Hydroxyacids1]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[2-Oxo-carboxylates]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''=>''' 1 [[IMIDAZOLE-ACETOL-P]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an (S)-2-hydroxyacid[c] '''+''' 1 oxygen[c] '''=>''' 1 a 2-oxo carboxylate[c] '''+''' 1 hydrogen peroxide[c]
+
** 1 D-erythro-imidazole-glycerol-phosphate[c] '''=>''' 1 imidazole acetol-phosphate[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-23_000460]]
+
* Gene: [[Ec-01_005110]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-15_000450]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-12_004150]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 34: Line 33:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16789 16789]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11040 11040]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01341 R01341]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03457 R03457]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P05414 P05414]
+
** [http://www.uniprot.org/uniprot/Q58109 Q58109]
−
** [http://www.uniprot.org/uniprot/Q07523 Q07523]
+
** [http://www.uniprot.org/uniprot/P06633 P06633]
−
** [http://www.uniprot.org/uniprot/P72842 P72842]
+
** [http://www.uniprot.org/uniprot/P10368 P10368]
−
** [http://www.uniprot.org/uniprot/P73119 P73119]
+
** [http://www.uniprot.org/uniprot/P06987 P06987]
−
** [http://www.uniprot.org/uniprot/O22544 O22544]
+
** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
−
** [http://www.uniprot.org/uniprot/O82077 O82077]
+
** [http://www.uniprot.org/uniprot/P44327 P44327]
−
** [http://www.uniprot.org/uniprot/O49506 O49506]
+
** [http://www.uniprot.org/uniprot/Q02134 Q02134]
−
** [http://www.uniprot.org/uniprot/Q43775 Q43775]
+
** [http://www.uniprot.org/uniprot/P64371 P64371]
−
** [http://www.uniprot.org/uniprot/O81692 O81692]
+
** [http://www.uniprot.org/uniprot/Q12578 Q12578]
−
** [http://www.uniprot.org/uniprot/O52792 O52792]
+
** [http://www.uniprot.org/uniprot/P18787 P18787]
 +
** [http://www.uniprot.org/uniprot/P16247 P16247]
 +
** [http://www.uniprot.org/uniprot/P28624 P28624]
 +
** [http://www.uniprot.org/uniprot/P34041 P34041]
 +
** [http://www.uniprot.org/uniprot/Q02986 Q02986]
 +
** [http://www.uniprot.org/uniprot/P40374 P40374]
 +
** [http://www.uniprot.org/uniprot/P48054 P48054]
 +
** [http://www.uniprot.org/uniprot/Q43072 Q43072]
 +
** [http://www.uniprot.org/uniprot/Q9X7B9 Q9X7B9]
 +
** [http://www.uniprot.org/uniprot/O48932 O48932]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycolate Oxidase}}
+
{{#set: common name=HAD hydrolase, subfamily IA}}
−
{{#set: common name=Alpha-hydroxy acid dehydrogenase, FMN-dependent}}
+
{{#set: ec number=EC-4.2.1.19}}
−
{{#set: ec number=EC-1.1.3.15}}
+
{{#set: gene associated=Ec-01_005110}}
−
{{#set: gene associated=Ec-23_000460|Ec-15_000450|Ec-12_004150}}
+
{{#set: in pathway=HISTSYN-PWY}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:03, 21 March 2018

Reaction IMIDPHOSDEHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • HAD hydrolase, subfamily IA
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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