Difference between revisions of "Ec-27 004070"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosp...")
(Created page with "Category:Gene == Gene Ec-27_004070 == * left end position: ** 3546837 * transcription direction: ** POSITIVE * right end position: ** 3548001 * centisome position: ** 54.9...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] ==
+
== Gene Ec-27_004070 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3546837
−
* common name:
+
* transcription direction:
−
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
+
** 3548001
 +
* centisome position:
 +
** 54.990513   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0000_0441
 +
** Esi0000_0441
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[4OH2OXOGLUTARALDOL-RXN]]
−
** 1 [[HOMO-SER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 L-homoserine[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c]
+
* Reaction: [[KDPGALDOL-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-12_003100]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: automated-name-match
−
== Pathways  ==
+
* Reaction: [[RXN-13990]]
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-2221]]
 +
* [[PWY-7310]]
 +
* [[PWY-6507]]
 +
* [[GALACTUROCAT-PWY]]
 +
* [[ENTNER-DOUDOROFF-PWY]]
 +
* [[PWY-7562]]
 +
* [[HYDROXYPRODEG-PWY]]
 +
* [[PWY-7242]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3546837}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24923 24923]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=3548001}}
−
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
{{#set: centisome position=54.990513    }}
−
{{#set: ec number=EC-4.4.1.1}}
+
{{#set: common name=Esi_0000_0441|Esi0000_0441}}
−
{{#set: gene associated=Ec-12_003100}}
+
{{#set: reaction associated=4OH2OXOGLUTARALDOL-RXN|KDPGALDOL-RXN|RXN-13990}}
−
{{#set: in pathway=}}
+
{{#set: pathway associated=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|HYDROXYPRODEG-PWY|PWY-7242}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:04, 21 March 2018

Gene Ec-27_004070

  • left end position:
    • 3546837
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3548001
  • centisome position:
    • 54.990513
  • Synonym(s):
    • Esi_0000_0441
    • Esi0000_0441

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004070&oldid=24375"