Difference between revisions of "PWY-7398"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec number...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** 5'-nucleotidase
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** coumarins biosynthesis (engineered)
* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''13''' reactions in the full pathway
** 1 [[UMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[URIDINE]][c] '''+''' 1 [[Pi]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
* With common name(s):
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** 2 associated gene(s):
** 1 UMP[c] '''+''' 1 H2O[c] '''=>''' 1 uridine[c] '''+''' 1 phosphate[c]
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*** [[Ec-10_001480]]
 
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*** [[Ec-04_001280]]
== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
* Gene: [[Ec-12_005060]]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
*** Assignment: GO-TERM
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*** [[Ec-28_003750]]
* Gene: [[Ec-15_000820]]
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** 2 reconstruction source(s) associated:
** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
*** Assignment: GO-TERM
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*** [[orthology-aragem]]
* Gene: [[Ec-05_000950]]
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* [[RXN-1126]]
** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-10_001480]]
== Pathways  ==
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*** [[Ec-04_001280]]
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
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** 1 reconstruction source(s) associated:
** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-aragem]]
== Reconstruction information  ==
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== Reaction(s) not found ==
* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12349 RXN-12349]
** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12350 RXN-12350]
*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12963 RXN-12963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12965 RXN-12965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14987 RXN-14987]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14988 RXN-14988]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14990 RXN-14990]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16762 RXN-16762]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16763 RXN-16763]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9697 RXN-9697]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29360 29360]
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{{#set: taxonomic range=TAX-33090}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
{{#set: common name=5'-nucleotidase}}
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{{#set: common name=coumarins biosynthesis (engineered)}}
{{#set: ec number=EC-3.1.3.5}}
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{{#set: reaction found=3}}
{{#set: gene associated=Ec-12_005060|Ec-15_000820|Ec-05_000950}}
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{{#set: total reaction=13}}
{{#set: in pathway=PWY-7185}}
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{{#set: completion rate=23.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:04, 21 March 2018

Pathway PWY-7398

Reaction(s) found

3 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links