Difference between revisions of "PWY-7254"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIENOYLCOAREDUCT-RXN DIENOYLCOAREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIENOYLCOAREDUCT-RXN DIENOYLCOAREDUCT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** NAD(P)-binding domain
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** TCA cycle VII (acetate-producers)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.34 EC-1.3.1.34]
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* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
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** citric acid cycle
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** Krebs cycle
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** Szent-Gyorgyi-Krebs cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''9''' reactions in the full pathway
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** 1 [[NADPH]][c] '''+''' 1 [[T2-C4-DECADIENYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[T2-DECENOYL-COA]][c]
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* [[2OXOGLUTARATEDEH-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 NADPH[c] '''+''' 1 trans-Δ2, cis-Δ4-decadienoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 trans-dec-2-enoyl-CoA[c]
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*** [[Ec-21_002300]]
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*** [[Ec-25_000020]]
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== Genes associated with this reaction  ==
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*** [[Ec-27_004160]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-16_003950]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[ACONITATEDEHYDR-RXN]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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== Pathways  ==
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*** [[Ec-16_001000]]
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== Reconstruction information  ==
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*** [[Ec-12_000170]]
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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* [[ACONITATEHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-16_001000]]
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*** [[Ec-12_000170]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-25_001360]]
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*** [[Ec-23_003460]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_003080]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14971]]
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** 6 associated gene(s):
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*** [[Ec-05_003640]]
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*** [[Ec-21_003470]]
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*** [[Ec-07_002870]]
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*** [[Ec-11_000360]]
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*** [[Ec-27_006560]]
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*** [[Ec-07_007310]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q16698 Q16698]
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{{#set: common name=TCA cycle VII (acetate-producers)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: reaction found=7}}
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{{#set: ec number=EC-1.3.1.34}}
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{{#set: total reaction=9}}
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{{#set: gene associated=Ec-16_003950}}
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{{#set: completion rate=78.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:05, 21 March 2018

Pathway PWY-7254

  • taxonomic range:
  • common name:
    • TCA cycle VII (acetate-producers)
  • Synonym(s):
    • tricarboxylic acid cycle
    • citric acid cycle
    • Krebs cycle
    • Szent-Gyorgyi-Krebs cycle

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7254&oldid=24477"