Difference between revisions of "PWY-5506"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3.5....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
+
** methanol oxidation to formaldehyde IV
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[MALEAMATE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[MALEATE]][c]
+
* [[CATAL-RXN]]
* With common name(s):
+
** 9 associated gene(s):
** 1 H2O[c] '''+''' 1 maleamate[c] '''=>''' 1 ammonium[c] '''+''' 1 maleate[c]
+
*** [[Ec-02_000470]]
 
+
*** [[Ec-07_001420]]
== Genes associated with this reaction  ==
+
*** [[Ec-00_008210]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Ec-11_003410]]
* Gene: [[Ec-26_006010]]
+
*** [[Ec-00_008230]]
** Source: [[orthology-aragem]]
+
*** [[Ec-00_010030]]
== Pathways  ==
+
*** [[Ec-00_008240]]
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
+
*** [[Ec-07_004600]]
** '''1''' reactions found over '''11''' reactions in the full pathway
+
*** [[Ec-05_003380]]
* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
+
** 2 reconstruction source(s) associated:
** '''1''' reactions found over '''6''' reactions in the full pathway
+
*** [[annotation-esiliculosus_genome]]
* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
+
*** [[orthology-aragem]]
** '''1''' reactions found over '''5''' reactions in the full pathway
+
== Reaction(s) not found ==
* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
+
* [http://metacyc.org/META/NEW-IMAGE?object=METHANOL-OXIDASE-RXN METHANOL-OXIDASE-RXN]
** '''1''' reactions found over '''10''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-aragem]]
+
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-4751}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
+
{{#set: common name=methanol oxidation to formaldehyde IV}}
* LIGAND-RXN:
+
{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
+
{{#set: total reaction=2}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: completion rate=50.0}}
{{#set: ec number=EC-3.5.1.107}}
+
{{#set: gene associated=Ec-26_006010}}
+
{{#set: in pathway=PWY-6993|PWY-722|PWY-5033|PWY-7128}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:07, 21 March 2018

Pathway PWY-5506

  • taxonomic range:
  • common name:
    • methanol oxidation to formaldehyde IV
  • Synonym(s):

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links