Difference between revisions of "Ec-06 005140"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Gene == Gene Ec-06_005140 == * left end position: ** 4273087 * transcription direction: ** NEGATIVE * right end position: ** 4274565 * centisome position: ** 48.7...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] ==
+
== Gene Ec-06_005140 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4273087
−
* common name:
+
* transcription direction:
−
** squalene monooxygenase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/1.14.14.17 EC-1.14.14.17]
+
** 4274565
 +
* centisome position:
 +
** 48.79202   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0052_0162
 +
** Esi0052_0162
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.7.13.3-RXN]]
−
** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[SQUALENE]][c] '''=>''' 1 [[EPOXYSQUALENE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
+
−
* With common name(s):
+
−
** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 squalene[c] '''=>''' 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-06_009670]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
== Pathways  ==
+
−
* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=4273087}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02873 R02873]
+
{{#set: transcription direction=NEGATIVE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874]
+
{{#set: right end position=4274565}}
−
* UNIPROT:
+
{{#set: centisome position=48.79202    }}
−
** [http://www.uniprot.org/uniprot/P52020 P52020]
+
{{#set: common name=Esi_0052_0162|Esi0052_0162}}
−
** [http://www.uniprot.org/uniprot/P32476 P32476]
+
{{#set: reaction associated=2.7.13.3-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9T064 Q9T064]
+
−
** [http://www.uniprot.org/uniprot/O65829 O65829]
+
−
** [http://www.uniprot.org/uniprot/O65726 O65726]
+
−
** [http://www.uniprot.org/uniprot/O65727 O65727]
+
−
** [http://www.uniprot.org/uniprot/O65402 O65402]
+
−
** [http://www.uniprot.org/uniprot/O65403 O65403]
+
−
** [http://www.uniprot.org/uniprot/O65404 O65404]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=squalene monooxygenase}}
+
−
{{#set: ec number=EC-1.14.14.17}}
+
−
{{#set: gene associated=Ec-06_009670}}
+
−
{{#set: in pathway=PWY-5670|PWY-6098}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:12, 21 March 2018

Gene Ec-06_005140

  • left end position:
    • 4273087
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4274565
  • centisome position:
    • 48.79202
  • Synonym(s):
    • Esi_0052_0162
    • Esi0052_0162

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_005140&oldid=25271"