Difference between revisions of "Ec-21 001490"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7648 RXN-7648] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Ec-21_001490 == * left end position: ** 2458375 * transcription direction: ** NEGATIVE * right end position: ** 2467712 * centisome position: ** 33.3...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7648 RXN-7648] ==
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== Gene Ec-21_001490 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2458375
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
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** NEGATIVE
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* right end position:
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** 2467712
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* centisome position:
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** 33.310776   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0025_0141
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** Esi0025_0141
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4.2.2.10-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-6991]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CPD-6992]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 (2S)-pinocembrin[c] '''=>''' 1 succinate[c] '''+''' 1 (+)-pinobanksin[c] '''+''' 1 CO2[c]
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* Reaction: [[5.99.1.3-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14897]]
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* Gene: [[Ec-19_002750]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: automated-name-match
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* Gene: [[Ec-19_002760]]
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== Pathways associated ==
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** Source: [[orthology-aragem]]
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* [[PWY-7243]]
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* Gene: [[Ec-08_003510]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5059]], pinobanksin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5059 PWY-5059]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2458375}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07993 R07993]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2467712}}
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{{#set: ec number=EC-1.14.11.9}}
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{{#set: centisome position=33.310776    }}
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{{#set: gene associated=Ec-19_002750|Ec-19_002760|Ec-08_003510}}
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{{#set: common name=Esi_0025_0141|Esi0025_0141}}
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{{#set: in pathway=PWY-5059}}
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{{#set: reaction associated=4.2.2.10-RXN|5.99.1.3-RXN|RXN-14897}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7243}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:13, 21 March 2018

Gene Ec-21_001490

  • left end position:
    • 2458375
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2467712
  • centisome position:
    • 33.310776
  • Synonym(s):
    • Esi_0025_0141
    • Esi0025_0141

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_001490&oldid=25437"