Difference between revisions of "Ec-17 003520"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.21.6-RXN 1.14.21.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Fatty acid hydroxyl...")
 
(Created page with "Category:Gene == Gene Ec-17_003520 == * left end position: ** 3706160 * transcription direction: ** NEGATIVE * right end position: ** 3712032 * centisome position: ** 77.2...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.21.6-RXN 1.14.21.6-RXN] ==
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== Gene Ec-17_003520 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3706160
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* common name:
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* transcription direction:
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** Fatty acid hydroxylase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
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** 3712032
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* centisome position:
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** 77.244705   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0166_0045
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** Esi0166_0045
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** SPPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11486]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[CPD-4186]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-4187]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 2 H+[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 lathosterol[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 7-dehydrocholesterol[c] '''+''' 2 H2O[c]
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* Reaction: [[RXN-9003]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-9384]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-01_003780]]
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* Reaction: [[RXN0-5180]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***EC-NUMBER
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* Reaction: [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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== Pathways ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
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*** Assignment: ec-number
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** '''9''' reactions found over '''22''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3]
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* [[PWY3O-19]]
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** '''9''' reactions found over '''22''' reactions in the full pathway
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* [[PWY-6520]]
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== Reconstruction information  ==
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* [[PWY-7235]]
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* [[annotation]]:
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* [[PWY-5805]]
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3706160}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18924 18924]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18920 18920]
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{{#set: right end position=3712032}}
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* LIGAND-RXN:
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{{#set: centisome position=77.244705    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07215 R07215]
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{{#set: common name=Esi_0166_0045|Esi0166_0045|SPPS}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-11486|RXN-9003|RXN-9384|RXN0-5180|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN}}
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{{#set: common name=Fatty acid hydroxylase}}
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{{#set: pathway associated=PWY3O-19|PWY-6520|PWY-7235|PWY-5805}}
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{{#set: ec number=EC-1.14.19.20}}
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{{#set: gene associated=Ec-01_003780}}
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{{#set: in pathway=PWY66-341|PWY66-3}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:13, 21 March 2018

Gene Ec-17_003520

  • left end position:
    • 3706160
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3712032
  • centisome position:
    • 77.244705
  • Synonym(s):
    • Esi_0166_0045
    • Esi0166_0045
    • SPPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_003520&oldid=25443"