Difference between revisions of "LEUCINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Gene == Gene Ec-16_004330 == * left end position: ** 4479527 * transcription direction: ** POSITIVE * right end position: ** 4483642 * centisome position: ** 83.9...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-16_004330 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 4479527
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic
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* right end position:
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** Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
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** 4483642
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
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** 83.92314   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0227_0056
 
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** Esi0227_0056
 
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** GGPPS1, C-term
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[FARNESYLTRANSTRANSFERASE-RXN]]
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* With identifiers:
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** 1 [[PROTON]][c] '''+''' 1 [[LEU]][c] '''+''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 L-leucine[c] '''+''' 1 a tRNAleu[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 an L-leucyl-[tRNAleu][c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_001400]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_008730]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-aragem]]
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* Reaction: [[FPPSYN-RXN]]
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** Source: [[orthology-aragem]]
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* Reaction: [[GPPSYN-RXN]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7736]]
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* [[PWY-7492]]
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* [[PWY-6659]]
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* [[PWY-6383]]
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* [[PWY-6691]]
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* [[PWY-6859]]
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* [[PWY-7709]]
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* [[PWY-7102]]
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* [[PWY-7182]]
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* [[PWY-5120]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7141]]
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* [[PWY-7720]]
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* [[PWY-7721]]
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* [[PWY-7517]]
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* [[PWY-7410]]
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* [[PWY-7659]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=4479527}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
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{{#set: right end position=4483642}}
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* LIGAND-RXN:
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{{#set: centisome position=83.92314    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
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{{#set: common name=Esi_0227_0056|Esi0227_0056|GGPPS1, C-term}}
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* UNIPROT:
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{{#set: reaction associated=FARNESYLTRANSTRANSFERASE-RXN|FPPSYN-RXN|GPPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/O27552 O27552]
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{{#set: pathway associated=PWY-7736|PWY-7492|PWY-6659|PWY-6383|PWY-6691|PWY-6859|PWY-7709|PWY-7102|PWY-7182|PWY-5120|PWY-5123|PWY-5122|PWY-7141|PWY-7720|PWY-7721|PWY-7517|PWY-7410|PWY-7659}}
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** [http://www.uniprot.org/uniprot/P56457 P56457]
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** [http://www.uniprot.org/uniprot/O51267 O51267]
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** [http://www.uniprot.org/uniprot/O83595 O83595]
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** [http://www.uniprot.org/uniprot/O84211 O84211]
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** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
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** [http://www.uniprot.org/uniprot/P47508 P47508]
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** [http://www.uniprot.org/uniprot/P36430 P36430]
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** [http://www.uniprot.org/uniprot/O66680 O66680]
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** [http://www.uniprot.org/uniprot/O67646 O67646]
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** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
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** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
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** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
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** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
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** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
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** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
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** [http://www.uniprot.org/uniprot/P43827 P43827]
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** [http://www.uniprot.org/uniprot/O58698 O58698]
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** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
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** [http://www.uniprot.org/uniprot/P26637 P26637]
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** [http://www.uniprot.org/uniprot/P75398 P75398]
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** [http://www.uniprot.org/uniprot/P73274 P73274]
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** [http://www.uniprot.org/uniprot/Q48955 Q48955]
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** [http://www.uniprot.org/uniprot/Q48964 Q48964]
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** [http://www.uniprot.org/uniprot/Q49051 Q49051]
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** [http://www.uniprot.org/uniprot/P11325 P11325]
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** [http://www.uniprot.org/uniprot/P07813 P07813]
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** [http://www.uniprot.org/uniprot/P10857 P10857]
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** [http://www.uniprot.org/uniprot/P15181 P15181]
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** [http://www.uniprot.org/uniprot/Q50192 Q50192]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic}}
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{{#set: common name=Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding}}
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{{#set: ec number=EC-6.1.1.4}}
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{{#set: gene associated=Ec-12_001400|Ec-06_008730}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:16, 21 March 2018

Reaction LEUCINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic
    • Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 L-leucine[c] + 1 a tRNAleu[c] + 1 ATP[c] => 1 AMP[c] + 1 an L-leucyl-[tRNAleu][c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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