Difference between revisions of "Ec-26 004180"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9674 RXN-9674] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, family GH1...")
(Created page with "Category:Gene == Gene Ec-26_004180 == * left end position: ** 4420749 * transcription direction: ** NEGATIVE * right end position: ** 4430718 * centisome position: ** 67.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9674 RXN-9674] ==
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== Gene Ec-26_004180 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4420749
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* common name:
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* transcription direction:
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** Beta-glucosidase, family GH1
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** NEGATIVE
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** Beta-glucosidase, family GH3
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* right end position:
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** Beta-glucosidase, family GH30
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** 4430718
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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** 67.15047   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0349_0015
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** Esi0349_0015
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[CPD-10277]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-12699]][c]
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* With common name(s):
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** 1 lotaustralin[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 (2R)-2-hydroxy-2-methylbutanenitrile[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_001850]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-04_002190]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-20_004800]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-26_002410]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-07_005240]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6002]], lotaustralin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6002 PWY-6002]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7092]], neolinustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4420749}}
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{{#set: common name=Beta-glucosidase, family GH1}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Beta-glucosidase, family GH3}}
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{{#set: right end position=4430718}}
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{{#set: common name=Beta-glucosidase, family GH30}}
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{{#set: centisome position=67.15047    }}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: common name=Esi_0349_0015|Esi0349_0015}}
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{{#set: gene associated=Ec-07_001850|Ec-04_002190|Ec-20_004800|Ec-26_002410|Ec-07_005240}}
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: in pathway=PWY-6002|PWY-7092}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:19, 21 March 2018

Gene Ec-26_004180

  • left end position:
    • 4420749
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4430718
  • centisome position:
    • 67.15047
  • Synonym(s):
    • Esi_0349_0015
    • Esi0349_0015

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_004180&oldid=26147"