Difference between revisions of "Ec-01 007350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(Created page with "Category:Gene == Gene Ec-01_007350 == * left end position: ** 6274840 * transcription direction: ** POSITIVE * right end position: ** 6285456 * centisome position: ** 60.8...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] ==
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== Gene Ec-01_007350 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6274840
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* transcription direction:
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** POSITIVE
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* right end position:
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** 6285456
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* centisome position:
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** 60.80958   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0002_0180
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** Esi0002_0180
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DTDPGLUCDEHYDRAT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-7418]][c] '''=>''' 1 [[COUMARIN]][c] '''+''' 1 [[WATER]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
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** 1 H+[c] '''+''' 1 coumarinate[c] '''=>''' 1 coumarin[c] '''+''' 1 H2O[c]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-7315]]
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* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
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* [[PWY-7316]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7301]]
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== Reconstruction information  ==
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* [[PWY-7312]]
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* [[annotation]]:
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* [[PWY-7657]]
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** [[pathwaytools]]:
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* [[PWY-7318]]
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*** [[esiliculosus_genome]]
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* [[PWY-6942]]
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* [[PWY-7104]]
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* [[PWY-7440]]
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* [[DTDPRHAMSYN-PWY]]
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* [[PWY-6953]]
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* [[PWY-6808]]
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* [[PWY-7413]]
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* [[PWY-6976]]
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* [[PWY-7688]]
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* [[PWY-6974]]
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* [[PWY-6973]]
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* [[PWY-3221]]
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* [[PWY-4821]]
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* [[PWY-7414]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6274840}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04999 R04999]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6285456}}
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{{#set: in pathway=PWY-5176}}
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{{#set: centisome position=60.80958    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=Esi_0002_0180|Esi0002_0180}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction associated=DTDPGLUCDEHYDRAT-RXN|UDP-GLUCURONATE-DECARBOXYLASE-RXN}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: pathway associated=PWY-7315|PWY-7316|PWY-7301|PWY-7312|PWY-7657|PWY-7318|PWY-6942|PWY-7104|PWY-7440|DTDPRHAMSYN-PWY|PWY-6953|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-4821|PWY-7414}}

Latest revision as of 19:14, 21 March 2018

Gene Ec-01_007350

  • left end position:
    • 6274840
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6285456
  • centisome position:
    • 60.80958
  • Synonym(s):
    • Esi_0002_0180
    • Esi0002_0180

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_007350&oldid=25504"